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Report for CCDS51885.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51885.1 Public Mus musculus 6 Zfp9 23 108 98 CCDS HistoryNCBI Gene:22750Re-query CCDS DB by CCDS ID:51885.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51885.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000161170.1 ENSMUSP00000123810.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000161170.1Link to Ensembl Protein Viewer:ENSMUSP00000123810.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000161170Re-query CCDS DB by Protein ID:ENSMUSP00000123810
Original member Current member NCBI NM_011763.2 NP_035893.1 Accepted alive Link to Nucleotide Sequence:NM_011763.2Link to Protein Sequence:NP_035893.1Re-query CCDS DB by Nucleotide ID:NM_011763Re-query CCDS DB by Protein ID:NP_035893Link to BLAST:NP_035893.1

Chromosomal Locations for CCDS 51885.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 118464335 118465400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118465835 118465898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118466828 118466920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118467239 118467365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 118477307 118477321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1365 nt):
ATGACCAAGTACAAGGGACCCGTGACATTAAGGGATGTTGCTGTGGAATTCTCCAAAGCAGAATGGAAGC
TCCTGACCCCTGCTCAGAAGTCCCTTTACAAAAATGTAATGCTGGAGACCTTCAGTAACCTGTTCTCTGT
GGGTTATCGTGTGGTTAAGCCAAGTGTGATTGCAAAGTTGAAGAAAGGAAAAGAGCCATGGCCATTAGAA
GAATTTTTCCGTAAGAGCCGTGGTGATAAGCGGCGGACCGCTCACGACCCCAGAGCCAAACATCAGGAGC
AACAGGCTGGAAATGCAAGGAAAGGAGAACTTACAAAGCATCAGAAAACTCCCACCCGGCATGAAAGCTA
CGACTGTAGCGAATGTGGAAAATCTTTCTGCCAGAAGTCTTCCCTACTGGCGCACCAGGAAACACACACC
AAGAAGTCCTATAAATGTGAGAAATGTGGACAAGCTTTCTATAAGAACGAAGACCTCACAATCCATCAGA
AAGTCCATACCAGAGATAAAACATACCCATGTAAAGAATGTAACAAAATTTTCTATCACCTGTCGTCTCT
CACTAGACATCTGAGGATCCACGCTGGGGAGAAACCCTACGAATGTAGCCAGTGTGATAAATCCTTCTAT
CAGAAGCCACACCTCACAGAGCACCAGAAAACACACACAGGGGAGAAGCCATTTGAGTGTAAGGAGTGTG
GGAAGTTCTTCTATGTGAAGGCATACCTCCTGGTGCACCAGAAAACACACACAGGCGAGAAGCCTTTTCA
GTGTAAGGAATGTGGGAAGTTCTTTTCACAAAAATCACACCTCACAGTACATCAGAGAACACACACAGGG
GAGAAACCCTACAAATGTAAGGAGTGCGGGAAACTCTTCTCTAGGAATTCACACCTCAAAACCCATCAGA
GAACCCACACAGGGGAGAAACCCTACAAATGTAAGGAGTGCGGAAACTGCTTCTACCAGAAGTCAGCCCT
CACCGTGCACCAGCGAACTCACACCGGGGAGAAACCTTTCGAATGCAGTAAGTGTGGGAAACACTTTTAC
TATAAGTCAGATCTCACCAAACACGAGAGAAAGCATACAGGGGAGAAGCCGTACGAATGTGCAGAGTGTG
GCAAATCTTTCTCTGTGAACTCAGTCCTTAGATTACACGAAAGGACTCACACGGGAGAGAAGCCATACGA
GTGTGAGATATGTGGGAAGTCCTTCTCTCAGAAGTCCCATTTTGTCATCCATCAGAGAAAACACACAGGG
GAGAAGCCCTATGAGTGCCAGGAGTGTGGGGAAGGCTTTATCCAGAAGTCACAACTCACATCACATCAGA
AGACACACTCCAAGAAGGGAAAGGCTAACAAGTAG

Translation (454 aa):
MTKYKGPVTLRDVAVEFSKAEWKLLTPAQKSLYKNVMLETFSNLFSVGYRVVKPSVIAKLKKGKEPWPLE
EFFRKSRGDKRRTAHDPRAKHQEQQAGNARKGELTKHQKTPTRHESYDCSECGKSFCQKSSLLAHQETHT
KKSYKCEKCGQAFYKNEDLTIHQKVHTRDKTYPCKECNKIFYHLSSLTRHLRIHAGEKPYECSQCDKSFY
QKPHLTEHQKTHTGEKPFECKECGKFFYVKAYLLVHQKTHTGEKPFQCKECGKFFSQKSHLTVHQRTHTG
EKPYKCKECGKLFSRNSHLKTHQRTHTGEKPYKCKECGNCFYQKSALTVHQRTHTGEKPFECSKCGKHFY
YKSDLTKHERKHTGEKPYECAECGKSFSVNSVLRLHERTHTGEKPYECEICGKSFSQKSHFVIHQRKHTG
EKPYECQECGEGFIQKSQLTSHQKTHSKKGKANK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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