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Report for CCDS49771.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49771.1 Public Mus musculus 16 Ube2v2 23 108 98 CCDS HistoryNCBI Gene:70620Re-query CCDS DB by CCDS ID:49771.1Re-query CCDS DB by GeneID:70620See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49771.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115776.1 ENSMUSP00000111442.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115776.1Link to Ensembl Protein Viewer:ENSMUSP00000111442.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000115776Re-query CCDS DB by Protein ID:ENSMUSP00000111442
Original member Current member NCBI NM_001159351.1 NP_001152823.1 Accepted alive Link to Nucleotide Sequence:NM_001159351.1Link to Protein Sequence:NP_001152823.1Re-query CCDS DB by Nucleotide ID:NM_001159351Re-query CCDS DB by Protein ID:NP_001152823Link to BLAST:NP_001152823.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001152823.1 103 Q9D2M8-2 103 100% 0 0

Chromosomal Locations for CCDS 49771.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 15556397 15556543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15581059 15581207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15594460 15594475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGGCGGTCTCCACAGGAGTTAAAGTTCCTCGTAATTTTCGCTTGTTGGAAGAACTTGAAGAAGGACAAA
AAGGAGTAGGTGATGGTACTGTTAGCTGGGGCCTTGAAGATGATGAAGACATGACACTTACAAGGTGGAC
AGGCATGATTATTGGGCCACCAAGGGTGGATGCACGGAGCATACCAGTATTAGCAAAATGGCAAAATTCC
TATAGCATTAAAGTCATACTTCAAGAGCTAAGACGTCTTATGATGTCCAAAGAAAATATGAAGCTTCCAC
AGCCTCCAGAAGGACAGACGTACAACAACTAA

Translation (103 aa):
MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRVDARSIPVLAKWQNS
YSIKVILQELRRLMMSKENMKLPQPPEGQTYNN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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