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Report for CCDS37976.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37976.1 Public Mus musculus 19 Cyp2c70 23 108 98 CCDS HistoryNCBI Gene:226105Re-query CCDS DB by CCDS ID:37976.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37976.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051846.12 ENSMUSP00000060584.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051846.12Link to Ensembl Protein Viewer:ENSMUSP00000060584.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000051846Re-query CCDS DB by Protein ID:ENSMUSP00000060584
Original member Current member NCBI NM_145499.2 NP_663474.2 Accepted alive Link to Nucleotide Sequence:NM_145499.2Link to Protein Sequence:NP_663474.2Re-query CCDS DB by Nucleotide ID:NM_145499Re-query CCDS DB by Protein ID:NP_663474Link to BLAST:NP_663474.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663474.2 489 Q91W64 489 100% 0 0

Chromosomal Locations for CCDS 37976.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 40153576 40153757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40156723 40156864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40160555 40160742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40164352 40164493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40165328 40165501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40167463 40167623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40180361 40180510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40183866 40184028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40187095 40187262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1470 nt):
ATGGCTCTCTTCATCTTTCTGGGGATTTGGCTTTCTTGTTTTCTTTTTCTTTTTCTATGGAATCAGCACC
GTGGCAGAGGGAAGCTCCCACCTGGCCCCACTCCTTTACCAATTGTTGGAAATATTTTGCAAGTAGATGT
TAAAAATATTAGCAAATCTATGGGCATGCTAGCAAAAAAGTATGGCCCTGTGTTTACTGTATACCTGGGC
ATGAAGCCCACTGTGGTGCTGCATGGATACAAAGCAATGAAGGAAGCTCTGATTGACCAGGGAGATGAGT
TTTCTGATAAAACGGATTCATCGTTACTCAGTAGAACCAGCCAAGGCTTAGGCATCGTCTTCAGCAATGG
AGAAACATGGAAACAAACCCGGCGTTTCTCCCTCATGGTCTTAAGGTCTATGGGGATGGGAAAGAAAACT
ATTGAAGACCGAATTCAGGAGGAAATCCTTTATATGTTGGATGCACTGAGAAAAACCAATGGCTCCCCCT
GTGATCCTAGCTTCCTTCTGGCCTGTGTTCCCTGCAATGTGATCTCTACTGTCATTTTCCAGCATCGATT
TGACTACAATGATCAGACATTCCAAGACTTCATGGAGAATTTTCATAGAAAAATAGAAATTTTAGCATCT
CCTTGGTCCCAGCTGTGCAGTGCCTACCCTATTTTATACTATCTCCCTGGAATCCATAACAGATTCTTAA
AAGATGTGACTCAACAGAAAAAGTTCATCTTGGAGGAAATAAACAGGCATCAAAAATCTCTGGACCTCAG
TAACCCTCAGGACTTTATTGACTACTTCTTGATTAAAATGGAAAAGGAAAAACACAATCAAAAATCTGAA
TTTACTATGGATAACCTGGTTGTCAGCATAGGTGATCTTTTTGGAGCCGGAACAGAGACAACGAGTTCCA
CAGTGAAATATGGGCTTTTGCTCCTGCTGAAGTACCCAGAAGTCACAGCTAAAATTCAGGAAGAAATTGC
TCATGTGATTGGTAGACATCGGAGACCCACCATGCAGGACAGGAACCACATGCCGTACACTGATGCTGTG
TTGCATGAGATTCAGAGATACATTGATTTTGTTCCCATTCCTTCACCTCGTAAGACAACGCAGGATGTGG
AGTTCAGAGGATACCACATTCCCAAGGGCACAAGTGTAATGGCATGTCTGACTTCTGTCCTGAATGATGA
CAAAGAATTTCCCAACCCAGAGAAGTTTGATCCTGGCCACTTTCTTGATGAGAAAGGGAACTTCAAAAAG
AGTGACTACTTTGTGGCTTTCTCAGCAGGAAGAAGAGCTTGTATTGGAGAAGGTCTGGCCCGCATGGAGA
TGTTTCTAATCCTGACCAACATCTTACAGCATTTTACTTTAAAACCTCTGGTTAAACCAGAGGACATCGA
CACCAAGCCAGTTCAAACTGGTTTATTGCATGTGCCTCCACCCTTTGAGCTCTGTTTCATTCCAGTCTGA

Translation (489 aa):
MALFIFLGIWLSCFLFLFLWNQHRGRGKLPPGPTPLPIVGNILQVDVKNISKSMGMLAKKYGPVFTVYLG
MKPTVVLHGYKAMKEALIDQGDEFSDKTDSSLLSRTSQGLGIVFSNGETWKQTRRFSLMVLRSMGMGKKT
IEDRIQEEILYMLDALRKTNGSPCDPSFLLACVPCNVISTVIFQHRFDYNDQTFQDFMENFHRKIEILAS
PWSQLCSAYPILYYLPGIHNRFLKDVTQQKKFILEEINRHQKSLDLSNPQDFIDYFLIKMEKEKHNQKSE
FTMDNLVVSIGDLFGAGTETTSSTVKYGLLLLLKYPEVTAKIQEEIAHVIGRHRRPTMQDRNHMPYTDAV
LHEIQRYIDFVPIPSPRKTTQDVEFRGYHIPKGTSVMACLTSVLNDDKEFPNPEKFDPGHFLDEKGNFKK
SDYFVAFSAGRRACIGEGLARMEMFLILTNILQHFTLKPLVKPEDIDTKPVQTGLLHVPPPFELCFIPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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