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Report for CCDS49830.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49830.1 Public Mus musculus 16 Muc20 23 108 98 CCDS HistoryNCBI Gene:224116Re-query CCDS DB by CCDS ID:49830.1Re-query CCDS DB by GeneID:224116See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49830.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041123.8 ENSMUSP00000041221.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041123.8Link to Ensembl Protein Viewer:ENSMUSP00000041221.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000041123Re-query CCDS DB by Protein ID:ENSMUSP00000041221
Original member Current member NCBI NM_146071.2 NP_666183.2 Accepted alive Link to Nucleotide Sequence:NM_146071.2Link to Protein Sequence:NP_666183.2Re-query CCDS DB by Nucleotide ID:NM_146071Re-query CCDS DB by Protein ID:NP_666183Link to BLAST:NP_666183.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666183.2 656 Q8BUE7 656 100% 0 0

Chromosomal Locations for CCDS 49830.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 32786325 32786393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32790100 32790191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32793196 32794929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 32797317 32797392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1971 nt):
ATGGGCTCTGTCTGGGGCCTGGCTGTGCCCCTCCTTGTCTTCTGCTGGAAGGTTGGCGTCAGTGTGAGCT
CTCCAGGTCTCGACATTAGCAGATCAGTTCCTTTGGTGACAACCAACAACATGGAAGTGTCCACCTTCAC
TCAAAGGGACAGGCCCAGCTCAGAGAGAGCTTTCCAGACCACCAACCTGATTCAGTATGTACCTCTAGAC
ACGCAAACTCTCAGCACTGAATCTGCTTCTAATGCTTTAAGTGCAACTAGTATCAGTTCAGAGGTCAATT
CCAGAGACACTCAGACCACCTCTTTTGTAACAAAGACCAGGAAGACACATACTACCACTCCTGCAGCATC
ATCCCTAGAGGCCCAGACCACCTCTCCTAATTTGTCAACCCTGAATATTCAGATTACCTCCCCAATAGCA
TCGTCCCTGGATGCTCAGACCATTTTTCCTGTATCATTATCCCTGAGTACCCAGACCACTTCTCCTGCAC
CATCATTCCTGGATACCCAAACCACTTCCCCTGAACCATCATCTCTGACCACTTCCCCTGCACCATCATC
TCTGATCACTTCTCCTACTCCATCATCTCTAACTACATCCCCTGCACCATCATTCCTGGATACCCAGACC
ACTTCCCCTGCACCATCATCTCTGACCACTTCCCCTGCACCATCATCCCTAGATACCCAGACCATCTCAC
CTATTGAATTGACCCTAAAGACCCAAACCATTTCCACTGTAACGGAGACCAGAACGGTTTCAATAAGAAT
ACCTTCTGACCTCACGGTTATGCACACCATCCCTACAGAGACATTGGCACCAAGCAACAGCCCCAGAACT
GGGATGAGCACTGTCCAAACTGGCACAGTGTGGGACTCCATAGAAGCCGTCTTTGACACCCTTTGTACCG
ATGACAGCTCTGAAGAGGCAAGGAAGATCACAGTTGACCTCCTGACGTTGGCACACACCTCCACGGAAGT
GGAGTACCTGTCTTCAGAGAGCAGCTCTTCCTCTGACAGTTCAGCTGGGGTCCTCAGCAGCTCACGAGTC
CTGGGACCCGACAGTGCAACTCCAGCCAAGGGGTTGGTTGCCTTCAACATCACTCATATTAAACTCAGCA
ACTGCATCACAGAAATAGAAACAACCATCACCATCTCTGGGGCCCCAGGCGCGAGCCTCAGCCCTACAGA
AGCGACGGCAGCTTTGTTCACTTCTGAGATATTAACTTTGCCTCCACCCACTGAGGCAAAACCAATTTTC
CCCGAGACCACAAGCTTATCTGGGATCCTGTCAACTGCTGGCACCCCGGCCCTTGCCACCACCCTTGAGG
GGACAGTCTCCACTAGTGCAATCACAGAAAGCGAAACAGCAGTGGCCCAGACTCTTACCTCTGTTGGAAC
TTCGGTGACAGTTAGAAGGAACCCCCTGGAAAACACTTCAACACTCTCTATTGAGACACAAAGCCACACT
GAGGTCTTGGGCACCATCACAGTCCCCATGGTTGCTGGATCAACAATGGGAGAAGCAGCCTCCTTCGTGA
GTTTCACGGCTCTCGACAGCAGCAGTCTCTCAGTGGTGGTCACCACCGAGAGCTCTGCTACCTCAGAGAC
TTTAACCACAGGCAATACAACCAACAGCTCCTTCCTCACAGAGAGCCACCCTCCTTTTTCTATCTATTCA
ACTACAGCTAGCACCAGCAAAAACCCAAACATCACCTTAACCAAGACCACAGCCTCACCAAAGCCCCCGA
CGCATCCTACAACATCTGCATCCACTGCTTGGATAAGGAAAACCACAAAACATGATCCAGGTGAAGATGG
AGGCTTCCTCCTTGTACGGCTGACCGTGGCCTCCCCTAAGGACCTCACTGAGCACAACGCCAGAGAGAAG
CTGATGAACCAGCTCCGCCGTGAACTGCACGCCCGCATGCCACTTGTCCACATGTCCTTCCTGAGCATCA
GGAGGGGTTGA

Translation (656 aa):
MGSVWGLAVPLLVFCWKVGVSVSSPGLDISRSVPLVTTNNMEVSTFTQRDRPSSERAFQTTNLIQYVPLD
TQTLSTESASNALSATSISSEVNSRDTQTTSFVTKTRKTHTTTPAASSLEAQTTSPNLSTLNIQITSPIA
SSLDAQTIFPVSLSLSTQTTSPAPSFLDTQTTSPEPSSLTTSPAPSSLITSPTPSSLTTSPAPSFLDTQT
TSPAPSSLTTSPAPSSLDTQTISPIELTLKTQTISTVTETRTVSIRIPSDLTVMHTIPTETLAPSNSPRT
GMSTVQTGTVWDSIEAVFDTLCTDDSSEEARKITVDLLTLAHTSTEVEYLSSESSSSSDSSAGVLSSSRV
LGPDSATPAKGLVAFNITHIKLSNCITEIETTITISGAPGASLSPTEATAALFTSEILTLPPPTEAKPIF
PETTSLSGILSTAGTPALATTLEGTVSTSAITESETAVAQTLTSVGTSVTVRRNPLENTSTLSIETQSHT
EVLGTITVPMVAGSTMGEAASFVSFTALDSSSLSVVVTTESSATSETLTTGNTTNSSFLTESHPPFSIYS
TTASTSKNPNITLTKTTASPKPPTHPTTSASTAWIRKTTKHDPGEDGGFLLVRLTVASPKDLTEHNAREK
LMNQLRRELHARMPLVHMSFLSIRRG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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