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Report for CCDS50518.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50518.1 Public Mus musculus 2 Il36g 23 108 98 CCDS HistoryNCBI Gene:215257Re-query CCDS DB by CCDS ID:50518.1Re-query CCDS DB by GeneID:215257See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50518.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057567.2 ENSMUSP00000053391.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057567.2Link to Ensembl Protein Viewer:ENSMUSP00000053391.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000057567Re-query CCDS DB by Protein ID:ENSMUSP00000053391
Original member Current member NCBI NM_153511.3 NP_705731.2 Accepted alive Link to Nucleotide Sequence:NM_153511.3Link to Protein Sequence:NP_705731.2Re-query CCDS DB by Nucleotide ID:NM_153511Re-query CCDS DB by Protein ID:NP_705731Link to BLAST:NP_705731.2

Chromosomal Locations for CCDS 50518.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 24187178 24187301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24187701 24187808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24188622 24188761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24192587 24192796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGGAAAACAATGAAAAAAAAAACATTGTGTATGGAAGTGATGTTGAGATGGAACACGAGAGAGCTGGGC
TATTTGTATCTTCAGCTATGTTTTCTAAACACCCATTTTCTACACACATCTCAGGAAGAGAAACTCCTGA
CTTTGGGGAGGTTTTTGACTTGGACCAGCAGGTGTGGATCTTTCGTAATCAGGCCCTTGTGACAGTTCCA
CGAAGCCACAGAGTAACCCCAGTCAGCGTGACTATCCTCCCATGCAAGTACCCAGAGTCTCTTGAACAGG
ACAAAGGGATTGCCATTTATTTGGGAATTCAGAATCCAGATAAATGCCTGTTTTGTAAGGAAGTTAATGG
ACACCCTACTTTGCTGCTAAAGGAAGAGAAGATTTTGGATTTGTACCACCACCCTGAGCCAATGAAGCCA
TTCCTGTTTTACCACACCCGGACAGGTGGAACATCCACCTTTGAATCAGTGGCTTTCCCTGGCCACTATA
TTGCCTCCTCCAAGACTGGCAACCCCATCTTCCTCACATCAAAAAAGGGAGAATATTACAACATTAACTT
CAATTTAGATATAAAGTCTTAA

Translation (193 aa):
MENNEKKNIVYGSDVEMEHERAGLFVSSAMFSKHPFSTHISGRETPDFGEVFDLDQQVWIFRNQALVTVP
RSHRVTPVSVTILPCKYPESLEQDKGIAIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILDLYHHPEPMKP
FLFYHTRTGGTSTFESVAFPGHYIASSKTGNPIFLTSKKGEYYNINFNLDIKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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