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Report for CCDS27300.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27300.1 Public Mus musculus 14 Wbp4 23 108 98 CCDS HistoryNCBI Gene:22380Re-query CCDS DB by CCDS ID:27300.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27300.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022601.6 ENSMUSP00000022601.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022601.6Link to Ensembl Protein Viewer:ENSMUSP00000022601.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000022601Re-query CCDS DB by Protein ID:ENSMUSP00000022601
Original member Current member NCBI NM_018765.3 NP_061235.2 Accepted alive Link to Nucleotide Sequence:NM_018765.3Link to Protein Sequence:NP_061235.2Re-query CCDS DB by Nucleotide ID:NM_018765Re-query CCDS DB by Protein ID:NP_061235Link to BLAST:NP_061235.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061235.2 376 Q61048 376 100% 0 0

Chromosomal Locations for CCDS 27300.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 79461922 79462129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79466183 79466349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79467273 79467463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79470105 79470180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79470687 79470733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79472352 79472525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79476803 79476932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79477042 79477104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79480373 79480445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 79480931 79480932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1131 nt):
ATGGCCGACTACTGGAAGTCACAACCAAAGAAATTCTGTGATTACTGCAAGTGCTGGATAGCAGACAATA
GGCCTAGTGTTGAGTTTCATGAAAGAGGAAAGAATCACAAGGAAAATGTGGCCAGGAGGATCAGTGAGAT
TAAACAGAAAAGCTTGGATAAGGCAAAGGAAGAAGAAAAGGCATCCAAGGAGTTTGCTGCCATGGAGGCA
GCCGCCCTGAAGGCGTACCAAGAGGATCTGAAAAGGCTCGGCTTACCCCTACCCTCAGACATTTCAGAGC
CAACTGTATCACCAGTCATCAGCACTGTCCAACCCACCCCTACGTCAAATCAACAGAAAGAGAAGAAAAA
GAAGAAGAAGAAGAAAGAAGCTTCAAAGGGTGGATGGGTGGAAGGCGTGACAGCCGACGGCCACTGCTAC
TATTATGATCTCATCACAGGAGCATCTCAATGGGAGAAGCCAGAAGGATTTCAAGGGAATTTGAAAAAGA
CAGCAGCAAAGGCCGTTTGGGTAGAAGGCTTAAGTGAAGACGGCTACACCTATTATTATAATACAGAAAC
AGGAGAATCCAAATGGGAAAAGCCTGAAGATTTCATCCCACATGGCGGGGATGTGCTTTCTAGTAAGGAC
AGTGGAAAGTTGCCCGACACCCTAGAAGACGCCAAGTCCTCCGATTCTCACAGTGATTCCGAAGGGGAAC
AGAAGAAAGCTGGAGAGGCCTCCACAGAGACCAAGAAGCTAATCATAAAGTTTAAGGAGAAAAATAAAAG
TACTGAGAAAAGAATTGGCCCAGAAATACAAAAAGAAAAAAGTACTCCAAAACAGAATCCATCAAATACA
AATGAAGAAAAACCCAAAACTCTTAAGAAATCGACAAACCCTTATGGGGAATGGCAAGAAATTAAACAGG
AGGCTGAGTCTCAAGAAGAAGTTGATTTGGAACTTCCAAGCACTGAAGGGGAATGTCTATCAACTTCAGA
AGCTGGCGTTGGGGAAATCAAAGTGGTATTTAAAGAGAAAACAGTTTCTTCTCTGGGAGTTGCAGCAGAT
GGAGTGGCCCCAGTCTTCAAAAAGAGAAGACTTGAAAATGGAAAATCTCGAAACTTAAGACAGCGAGGTG
ACGACGAGTGA

Translation (376 aa):
MADYWKSQPKKFCDYCKCWIADNRPSVEFHERGKNHKENVARRISEIKQKSLDKAKEEEKASKEFAAMEA
AALKAYQEDLKRLGLPLPSDISEPTVSPVISTVQPTPTSNQQKEKKKKKKKKEASKGGWVEGVTADGHCY
YYDLITGASQWEKPEGFQGNLKKTAAKAVWVEGLSEDGYTYYYNTETGESKWEKPEDFIPHGGDVLSSKD
SGKLPDTLEDAKSSDSHSDSEGEQKKAGEASTETKKLIIKFKEKNKSTEKRIGPEIQKEKSTPKQNPSNT
NEEKPKTLKKSTNPYGEWQEIKQEAESQEEVDLELPSTEGECLSTSEAGVGEIKVVFKEKTVSSLGVAAD
GVAPVFKKRRLENGKSRNLRQRGDDE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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