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Report for CCDS37161.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37161.1 Public Mus musculus 15 Cyp2d34 23 108 98 CCDS HistoryNCBI Gene:223706Re-query CCDS DB by CCDS ID:37161.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 37161.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109515.2 ENSMUSP00000105141.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109515.2Link to Ensembl Protein Viewer:ENSMUSP00000105141.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000109515Re-query CCDS DB by Protein ID:ENSMUSP00000105141
Original member Current member NCBI NM_145474.2 NP_663449.2 Accepted alive Link to Nucleotide Sequence:NM_145474.2Link to Protein Sequence:NP_663449.2Re-query CCDS DB by Nucleotide ID:NM_145474Re-query CCDS DB by Protein ID:NP_663449Link to BLAST:NP_663449.2

Chromosomal Locations for CCDS 37161.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82616022 82616212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82616313 82616454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82616748 82616935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82617132 82617273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82617456 82617632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82618259 82618419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82618510 82618662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82618931 82619102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82620669 82620857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1515 nt):
ATGGAGTTGCTGACTGGAACTGGTTTGTGGTCTGTGGCCATATTCACGGTCATCTTCCTGATTCTGGTGG
ACCTGATGCACCGGCGCCAGCACTGGACTTCTCGCTACCCACCAGGCCCTGTGCCATGGCCTGTGCTGGG
TAACCTGCTGCAGGTGGACCTGGATAACATTCCATACAGCTTGTACAAGCTTCAAAACCGCTATGGTGAT
GTGTTCAGTCTGCAGATGGCCTGGAAGCCCGTGGTTGTGATCAATGGACTAAAGGCGATGCAGGAAGTGC
TGTTGACCTGTGGCAAGGACACTGCTGACCACCCTCCAGTGCCCATATTTGAGTACCTAGGTTTTAAGAG
CAAATCCCAAGGTGTGGTCCTTGCATCTTACGGGCCCGAGTGGCGAGAGCAGAGGCAATTCTCTGTATCC
ACCCTGCGAAACTTCGGCCTGGGCAAGAAATCTCTGGAGGAGTGGGTAACCAAGGAGGCCAAACACCTCT
GTGATGCCTTCACCGCCCGGGCTGGGCAGTCCATCAATCCCAACACCATGCTGAACAACGCTGTGTGCAA
TGTGATTGCATCTCTCATTTTTGCCCGTCGCTTTGAATATGAAGACCCTTTCCTCATCAGGATGCTAAAA
ATGCGGGAAGAAAGTTTGAAAGAAGTCACTGGCTTCATTCCTGGGGTTCTTAACACGTTCCCAATACTCC
TGCGAATCCCAGGGCTGGCTGACATGGTCTTCCAAAGTCAGAAGACCTTCATGGCCATACTGGATAACCT
AGTTACTGAGAATAGGACCACCTGGGACCCTGACCAGCCACCCCGAAATTTGGCCGATGCCTTCCTAGCA
GAGATACAGAAGGCCAAGGGGAATCCTGAGAGCAGCTTCAATGATGAGAACCTGTGCATGGTGGTGAGTG
ATCTCTTCACTGCAGGGATGGTGACCACCTCAACCACACTGTCCTGTGCCCTGCTGCTCATGATCCTGCA
TCCGGATGTGCAGCGTAGAGTTCAACAGGAAATCGATGCAGTCATAGGGCAGGTGCGGTGTCCAGAGATG
GCAGACCAGGCCCGCATGCCCTACACCAATGCTGTCATTCATGAGGTGCAACGCTTTGGGGACATTATTC
CATTGAATATACCACGCATCACAAGTCGTGACATTGAAGTCCAGGATTTTCTGATCCCCAAGGGCACGAT
CCTCATCCCCAACATGTCGTCCATGCTGAAGGATGAGACTGTCTGGGAAAAGCCCCTCCGCTTCTATCCT
GAACACTTCCTGGATGCCCAGGGCCACTTTGTGAAGCCTGAGGCCTTCATGCCATTCTCAGCAGGCCGCA
GATCATGCCTGGGTGAGCCCCTGGCCCGAATGGAGCTCTTCCTCTTCTTCACCTGCCTCCTGCAGCGCTT
TAGCTTCTCAGTGCCAGCTGGACAGCCCCAGCCCAGTGACCATAGAATCTTTGCTATTCCAGTTGCCCCC
TACCCCTACCAGGTCTGTGCTATAATGCGTGAGCAAGGACACTAA

Translation (504 aa):
MELLTGTGLWSVAIFTVIFLILVDLMHRRQHWTSRYPPGPVPWPVLGNLLQVDLDNIPYSLYKLQNRYGD
VFSLQMAWKPVVVINGLKAMQEVLLTCGKDTADHPPVPIFEYLGFKSKSQGVVLASYGPEWREQRQFSVS
TLRNFGLGKKSLEEWVTKEAKHLCDAFTARAGQSINPNTMLNNAVCNVIASLIFARRFEYEDPFLIRMLK
MREESLKEVTGFIPGVLNTFPILLRIPGLADMVFQSQKTFMAILDNLVTENRTTWDPDQPPRNLADAFLA
EIQKAKGNPESSFNDENLCMVVSDLFTAGMVTTSTTLSCALLLMILHPDVQRRVQQEIDAVIGQVRCPEM
ADQARMPYTNAVIHEVQRFGDIIPLNIPRITSRDIEVQDFLIPKGTILIPNMSSMLKDETVWEKPLRFYP
EHFLDAQGHFVKPEAFMPFSAGRRSCLGEPLARMELFLFFTCLLQRFSFSVPAGQPQPSDHRIFAIPVAP
YPYQVCAIMREQGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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