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Report for CCDS27632.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27632.1 Public Mus musculus 15 Eif3l 23 108 98 CCDS HistoryNCBI Gene:223691Re-query CCDS DB by CCDS ID:27632.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27632.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040518.5 ENSMUSP00000038839.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040518.5Link to Ensembl Protein Viewer:ENSMUSP00000038839.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000040518Re-query CCDS DB by Protein ID:ENSMUSP00000038839
Original member Current member NCBI NM_145139.2 NP_660121.2 Accepted alive Link to Nucleotide Sequence:NM_145139.2Link to Protein Sequence:NP_660121.2Re-query CCDS DB by Nucleotide ID:NM_145139Re-query CCDS DB by Protein ID:NP_660121Link to BLAST:NP_660121.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660121.2 564 Q8QZY1 564 100% 0 0

Chromosomal Locations for CCDS 27632.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 79075260 79075292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79075771 79075819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79076831 79077041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79078074 79078153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79078993 79079054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79081587 79081656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79081854 79081927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79084112 79084283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79085557 79085711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79086434 79086604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79089464 79089961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79093337 79093417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79094201 79094239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1695 nt):
ATGTCTTACCCCGCTGATGACTACGAGTCTGAGGCTGCTTATGATCCCTACGCCTACCCGGGCGACTATG
ATATGCACACAGGAGATCCGAAGCAGGACCTTGCCTATGAGCGGCAGTATGAGCAGCAGACATATCAGGT
GATACCGGAAGTGATCAAAAACTTCATCCAGTACTTCCACAAGACTGTCTCCGATTTGATTGACCAGAAG
GTGTACGAGCTTCAGGCCAGCCGCGTCTCGAGTGATGTCATTGACCAGAAGGTGTACGAGATCCAGGACA
TTTACGAGAACAGCTGGACCAAGCTAACTGAAAGGTTCTTCAAGAATACACCGTGGCCTGAGGCAGAAGC
AATTGCACCCCAAGTTGGCAATGATGCCGTATTCCTAATTTTGTACAAAGAATTGTACTACAGGCATATT
TACGCCAAAGTCAGTGGGGGTCCCTCCTTAGAACAGAGGTTCGAATCTTATTACAACTACTGCAATCTCT
TCAACTACATCCTCAATGCGGATGGACCTGCGCCCCTTGAACTCCCCAACCAGTGGCTCTGGGACATCAT
CGATGAGTTCATCTACCAGTTCCAGTCATTCAGTCAGTACCGCTGCAAGACGGCCAAGAAGTCAGAGGGA
GAGATGGACTTCCTTAGGTCCAACCCTAAAGTCTGGAACGTGCACAGCGTCCTCAACGTGCTGCACTCCC
TGGTGGACAAGTCCAACATCAACCGGCAGCTGGAGGTCTACACCAGCGGAGGTGACCCGGAAAGTGTAGC
TGGGGAGTATGGACGACACTCCCTCTACAAGATGCTCGGCTACTTCAGCCTGGTGGGGCTTCTGCGCCTG
CATTCTCTACTGGGGGATTACTACCAGGCTATCAAGGTGCTGGAGAATATCGAGCTGAACAAGAAAAGCA
TGTATTCCCGTGTGCCTGAGTGCCAGGTCACCACCTACTATTATGTTGGCTTTGCGTATTTAATGATGCG
TCGATATCAGGATGCTATCCGAGTCTTTGCCAACATCCTCCTGTACATCCAGAGGACCAAGAGTATGTTC
CAGAGGACCACATACAAATATGAAATGATTAACAAGCAGAACGAGCAGATGCATGCTCTGCTGGCCATTG
CTCTCACCATGTACCCGATGCGGATCGACGAGAGCATACACCTCCAGCTGCGGGAGAAATACGGGGACAA
GATGCTGCGCATGCAGAAGGGGGACCCCCAGGTCTATGAGGAACTTTTCAGCTATGCCTGCCCCAAGTTC
CTGTCGCCTGTGGTGCCAAACTACGACAATGTCCATCCTAACTACCACAAAGAGCCCTTCCTGCAGCAGC
TGAAGGTGTTTTCCGATGAGGTGCAGCAGCAGGCCCAGCTCTCCACCATCCGCAGCTTCCTCAAGCTCTA
CACCACCATGCCTGTGGCCAAGCTGGCCGGCTTCCTGGACCTCACCGAGCAGGAGTTCCGCATCCAGCTG
CTCGTCTTCAAGCACAAGATGAAGAATCTGGTGTGGACCAGTGGCATTTCTGCCCTAGATGGCGAATTCC
AGTCGGCCTCGGAGGTGGACTTCTATATTGATAAGGACATGATCCATATTGCAGACACCAAAGTTGCCAG
ACGCTATGGGGATTTCTTTATCCGACAGATCCACAAGTTTGAAGAGCTTAATCGAACCCTGAAGAAGATG
GGACAGAGGCCCTGA

Translation (564 aa):
MSYPADDYESEAAYDPYAYPGDYDMHTGDPKQDLAYERQYEQQTYQVIPEVIKNFIQYFHKTVSDLIDQK
VYELQASRVSSDVIDQKVYEIQDIYENSWTKLTERFFKNTPWPEAEAIAPQVGNDAVFLILYKELYYRHI
YAKVSGGPSLEQRFESYYNYCNLFNYILNADGPAPLELPNQWLWDIIDEFIYQFQSFSQYRCKTAKKSEG
EMDFLRSNPKVWNVHSVLNVLHSLVDKSNINRQLEVYTSGGDPESVAGEYGRHSLYKMLGYFSLVGLLRL
HSLLGDYYQAIKVLENIELNKKSMYSRVPECQVTTYYYVGFAYLMMRRYQDAIRVFANILLYIQRTKSMF
QRTTYKYEMINKQNEQMHALLAIALTMYPMRIDESIHLQLREKYGDKMLRMQKGDPQVYEELFSYACPKF
LSPVVPNYDNVHPNYHKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFRIQL
LVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFFIRQIHKFEELNRTLKKM
GQRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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