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Report for CCDS55879.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55879.1 Public Homo sapiens 12 C12orf75 24 110 108 CCDS HistoryNCBI Gene:387882Re-query CCDS DB by CCDS ID:55879.1Re-query CCDS DB by GeneID:387882See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55879.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000443585.6 ENSP00000448536.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000443585.6Link to Ensembl Protein Viewer:ENSP00000448536.2Re-query CCDS DB by Nucleotide ID:ENST00000443585Re-query CCDS DB by Protein ID:ENSP00000448536
Original member Current member NCBI NM_001145199.2 NP_001138671.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145199.2Link to Protein Sequence:NP_001138671.1Re-query CCDS DB by Nucleotide ID:NM_001145199Re-query CCDS DB by Protein ID:NP_001138671Link to BLAST:NP_001138671.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138671.1 63 Q8TAD7 63 100% 0 0

Chromosomal Locations for CCDS 55879.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 105330892 105330937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105348602 105348626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105365807 105365842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105366617 105366696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105367472 105367476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (192 nt):
ATGGGCTGCGGGAACTCCACCGCCACCAGCGCGGGCGCGGGCCAAGGCCCTGCAGGAGCAGCCAAAGATG
TAACAGAAGAATCCGTAACAGAAGATGACAAGAGGAGAAACTATGGAGGAGTATATGTTGGCCTACCATC
TGAAGCTGTCAATATGGTGTCCAGTCAAACAAAGACGGTTCGGAAAAATTAG

Translation (63 aa):
MGCGNSTATSAGAGQGPAGAAKDVTEESVTEDDKRRNYGGVYVGLPSEAVNMVSSQTKTVRKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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