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Report for CCDS24804.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24804.1 Public Mus musculus 11 Map2k3 23 108 98 CCDS HistoryNCBI Gene:26397Re-query CCDS DB by CCDS ID:24804.1Re-query CCDS DB by GeneID:26397See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24804.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000019076.9 ENSMUSP00000019076.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000019076.9Link to Ensembl Protein Viewer:ENSMUSP00000019076.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000019076Re-query CCDS DB by Protein ID:ENSMUSP00000019076
Original member Current member NCBI NM_008928.5 NP_032954.1 Accepted alive Link to Nucleotide Sequence:NM_008928.5Link to Protein Sequence:NP_032954.1Re-query CCDS DB by Nucleotide ID:NM_008928Re-query CCDS DB by Protein ID:NP_032954Link to BLAST:NP_032954.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032954.1 347 O09110-1 347 100% 0 0

Chromosomal Locations for CCDS 24804.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 60932223 60932271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60941880 60941946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60942305 60942353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60943151 60943264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60943487 60943606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60944665 60944781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60945511 60945562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60946644 60946771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60947111 60947188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60949921 60950060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60951158 60951203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60951764 60951847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1044 nt):
ATGGAGTCGCCCGCCGCGAGCCCGCCGGCCAGCTTGCCTCAGACCAAAGGAAAATCCAAAAGGAAAAAGG
ACTTACGGATATCCTGCGTGTCCAAGCCACCTGTGTCCAACCCCACACCCCCCCGGAACCTGGACTCCCG
GACCTTCATCACTATCGGAGACAGAAACTTCGAAGTGGAGGCTGATGACTTGGTGACCATCTCAGAGCTG
GGTCGTGGAGCCTATGGGGTGGTAGAGAAAGTGCGGCATGCTCAGAGTGGTACCATCATGGCTGTCAAGC
GCATCCGGGCCACAGTGAACACACAGGAGCAGAAACGTCTGCTTATGGACCTAGACATCAACATGCGCAC
GGTCGACTGCTTCTACACTGTCACCTTCTATGGTGCCCTCTTCAGAGAGGGGGATGTATGGATCTGCATG
GAGCTCATGGACACTTCCCTGGATAAGTTCTACCGGAAGGTGCTGGAGAAGAACATGAAAATTCCGGAAG
ACATCCTGGGGGAGATCGCTGTGTCTATCGTGCGGGCCCTGGAGCACCTGCATAGCAAGCTGTCTGTGAT
CCACAGAGATGTGAAGCCATCCAATGTCCTCATCAACAAGGAAGGGCATGTGAAGATGTGCGACTTTGGC
ATCAGTGGCTACCTGGTGGACTCTGTGGCAAAGACAATGGATGCTGGCTGCAAGCCTTACATGGCCCCTG
AGAGGATCAACCCTGAACTGAATCAGAAGGGCTACAATGTCAAGTCTGATGTCTGGAGCCTCGGCATCAC
CATGATCGAGATGGCCATTCTGCGATTCCCTTATGAGTCTTGGGGCACACCGTTCCAGCAGCTGAAGCAG
GTGGTGGAGGAGCCATCCCCACAGCTCCCAGCGGACCAGTTCTCCCCTGAGTTTGTGGACTTCACTAGCC
AGTGCCTAAGGAAGAACCCTGCAGAGCGCATGAGCTACCTGGAGCTGATGGAACACCCATTCTTCACCTT
GCACAAAACTAAGAAGACAGACATTGCTGCCTTTGTGAAGGAGATCCTGGGAGAGGATTCATAG

Translation (347 aa):
MESPAASPPASLPQTKGKSKRKKDLRISCVSKPPVSNPTPPRNLDSRTFITIGDRNFEVEADDLVTISEL
GRGAYGVVEKVRHAQSGTIMAVKRIRATVNTQEQKRLLMDLDINMRTVDCFYTVTFYGALFREGDVWICM
ELMDTSLDKFYRKVLEKNMKIPEDILGEIAVSIVRALEHLHSKLSVIHRDVKPSNVLINKEGHVKMCDFG
ISGYLVDSVAKTMDAGCKPYMAPERINPELNQKGYNVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQ
VVEEPSPQLPADQFSPEFVDFTSQCLRKNPAERMSYLELMEHPFFTLHKTKKTDIAAFVKEILGEDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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