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Report for CCDS51027.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51027.1 Public Mus musculus 3 Bcl2l15 23 108 98 CCDS HistoryNCBI Gene:229672Re-query CCDS DB by CCDS ID:51027.1Re-query CCDS DB by GeneID:229672See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51027.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062945.11 ENSMUSP00000052210.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062945.11Link to Ensembl Protein Viewer:ENSMUSP00000052210.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000062945Re-query CCDS DB by Protein ID:ENSMUSP00000052210
Original member Current member NCBI NM_001142959.1 NP_001136431.1 Accepted alive Link to Nucleotide Sequence:NM_001142959.1Link to Protein Sequence:NP_001136431.1Re-query CCDS DB by Nucleotide ID:NM_001142959Re-query CCDS DB by Protein ID:NP_001136431Link to BLAST:NP_001136431.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001136431.1 167 Q08ED0 167 100% 0 0

Chromosomal Locations for CCDS 51027.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 103832832 103832967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 103833356 103833477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 103836043 103836270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 103838533 103838550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (504 nt):
ATGTCTAAAATGAAAAACCCTCGGACTTTTGAGGAGCAAACAGAATGCATCGTGAATTCTCTACTCAAAG
ACTTCAGGACCCCACTATCCCACGCTGCTAACCGGAACCTATCGGGTGCAGATGAACCATGCTCAGGAGA
GGATTACTCTTTTGATGTGGCTATCATTGTTGGCCGCCTTCGAATACTGGGTGATCAGTTCAATGGAGAG
CTGGAAGCTTCTGCCAATAATATCATTGCGGTAACCATTGGAGGACAGGCAGGAAGTACTGTACTCAACG
ACACAGTACAGTCTCTCAGCAGAACCTGGTGCACTCAGGATCCTACTTTAGTTTTTGAACGAGCCTTTTT
GGCAGTATCAGTAAAACTTCTTGAATATGTGGTCCGTAAGGCTCCAAACGTGGCAAGACAGGTGGCTAAC
TACGTGACGGGCATGATCAACGGGAACACAGCCATCCGCGAGTTTATCCAGGGCCAGGGAGGATGGGAAA
ACCTGGAGAGCTGA

Translation (167 aa):
MSKMKNPRTFEEQTECIVNSLLKDFRTPLSHAANRNLSGADEPCSGEDYSFDVAIIVGRLRILGDQFNGE
LEASANNIIAVTIGGQAGSTVLNDTVQSLSRTWCTQDPTLVFERAFLAVSVKLLEYVVRKAPNVARQVAN
YVTGMINGNTAIREFIQGQGGWENLES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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