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Report for CCDS25704.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25704.1 Public Mus musculus 11 Engase 23 108 98 CCDS HistoryNCBI Gene:217364Re-query CCDS DB by CCDS ID:25704.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25704.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000135383.8 ENSMUSP00000117538.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000135383.8Link to Ensembl Protein Viewer:ENSMUSP00000117538.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000135383Re-query CCDS DB by Protein ID:ENSMUSP00000117538
Original member Current member NCBI NM_172573.3 NP_766161.1 Accepted alive Link to Nucleotide Sequence:NM_172573.3Link to Protein Sequence:NP_766161.1Re-query CCDS DB by Nucleotide ID:NM_172573Re-query CCDS DB by Protein ID:NP_766161Link to BLAST:NP_766161.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766161.1 734 Q8BX80-1 734 100% 0 0

Chromosomal Locations for CCDS 25704.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 118476986 118477104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118478883 118478953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118479086 118479287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118481276 118481424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118481874 118482031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118482532 118482680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118482882 118483047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118484418 118484521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118484840 118484948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118485124 118485314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118485757 118485905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118486448 118486553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118486822 118486936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118487091 118487507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2205 nt):
ATGGAGACCTCGTCGGTGCTGACCCGGGGAGCTGCAAGGCAGCGGAGCCCCGCGGCCCCGGAGAAGCAGG
CGCGGGACCAGACGGAGCGGAGGCCGGGGCGGCGGAGGCAGGGGCGGAGGATCAACGAGGATCAAGAGGA
GGAAGCAGTCTTTAGAGAGGTGGTCAGTTTCACCCCGGATCCTTTACCAGCTAGATATTATGACAAGGAT
ACTACCAGACCTATCAGCTTTTACCTGTCGACGCTGGAGGAGCTCCTGGCCTGGACCCCGCTCATGGAGG
ATGGCTTCAATGTAGCCCTGGAACCCCTGGTGTGTCGCCGGCCTCCACTCAGCAGCCCCAGGCCCCGGAC
CCTGCTGTGCCACGACATGATGGGTGGTTACCTGGAGGACAGGTTCATTCAGGGCTCAGAGGTGCAGAAC
CCCTATTCCTTCTACCACTGGCAGTATATCGACATCTTTGTGTACTTCAGCCACCACACGGTCACCATCC
CCCCAGTGTGCTGGACCAATGCCGCACACAGGCACGGGGTCTGCGTGCTGGGGACCTTCATCACAGAGTG
GCAAGAGGGAGGCAGGCTCTGCGAAGCCTTCCTGGCCGGGGATGAGCCCTCCTTCCAGGCCGTGGCCGAT
CGGCTGGTCCAGATTGCTCAGTTCTTTCGTTTTGACGGCTGGCTCATCAACATCGAGAACTCCCTGACTC
CAGCTGCCGTGAGGAACACACCTTTATTTCTCCAGTACCTTACCGCACAGCTCCATCAGCAGGTCCCCGG
AGGTCTGGTGCTGTGGTACGACAGTGTGGTACAGAGCGGGCAGCTCAAGTGGCAGGATGAACTGAATGAT
CAGAACCGGGTCTTCTTTGACTCCTGCGATGGCTTCTTTACCAACTATAACTGGCGGGAGGATCACCTGC
AGCGGATGGTGGCACAGGCCGGGGAGCGCCTGGCTGACGTGTACGTGGGAGTGGATGTGTTTGCTCGGAG
CAATGTGGTCGGAGGCCGTTTTGATACTGACAAGTCCCTGGAGCTGATCCGCAAACATGGCTTCTCGGCG
GCGCTGTTTGCTCCTGGGTGGGTGTATGAGTGTCTGGAGAAGAGCGACTTCTTTCAGAACCAGGACAAGT
TCTGGAGCCTGCTGGAGCGCTTCCTTCCCACACACAGTATCTGCTCCCTGCCCTTCGTCACCTCTTTCTG
CCTGGGCCTGGGTACTCGAAGAGTCTGCTACGGCAAGGAGCAAGCAGTGGGGCCCTGGTACCACCCTAGC
GCCCAGGAGACACAGCCCCTCTTTGGTGAACATAAGCTGGCTGGTGACAGTCGGGGCTGGGTGAAGACGC
ACTGCTGCCTGACTGATGCCTGGCACGGGGGCAGCTCTCTGCTGCTCCGGGGCCTGATCCCGCCTGAGGT
TGACAGTGTAGCTGTGAGGCTGTTCTCTCTGCACATCCCAGTGCCACCCAAGGTTTTCCTGTCCATGGTG
TACAAGTTTGAAGGCTCAACAGATGTCCAGGTGGCTTTGGAGCTCACAACAGGGGATGCCAGCAGCTGTC
ATGTGGGTGGCATGTTGGTGTTAAATGAAACTGGCTCACGGCACAGCCCCAGACCCCTCCGGGTACCCCC
CACCAGGCTGGCCAGATGGGCCAGCAGTTGTGGCCAGCAGCTCAGTGGGGGCTGGATTCAACGCTGCTAT
GAGGTAAACCTTCGTGGGTGCCTGCTCCAGGACCTCTTGGTGAGCTTCTCACGGCCGCCAGGCAGCCGGG
AGGAGGAGAGCTTCATTTGTCGCCTTGGAGAGATCCAGGTGGTTGATGCCAGCAGCCTTCTGGCCCCTCT
GCCCCGGGTGCAGAATGTCACCATTTCTCAGATACGATGGCTTCCTCTGATCACCGGGTCTGAGGGCCTC
CCTACCCGGCTCCTCCTCAGCTGCACCCTGCACTGGTCCTACCTGCTGCTCCGAGCCCGCTGCTTCCGCA
TTCACTGCTGGAAACGGACAGGAAGCAGCAGCTCTGTGGCAGAGTCCCCAGAGACAGAGAAGCCCACGTT
CCTGGGCCTGGCTTTCGCCAACCAGTACCGTGTGGTGGACTTGGCTGTGGAGGCTGCTGGATTTGGGCAG
GATGGTCGTGTGGAGTTCCTGGTGGAGCCTGTCCCCAGGGAGGGTTTCCTGGTGCCCCAGGCTGAGTGGG
GAAAGGCGGTCCTGCTCTTCTCGGTCCCTCAGTGA

Translation (734 aa):
METSSVLTRGAARQRSPAAPEKQARDQTERRPGRRRQGRRINEDQEEEAVFREVVSFTPDPLPARYYDKD
TTRPISFYLSTLEELLAWTPLMEDGFNVALEPLVCRRPPLSSPRPRTLLCHDMMGGYLEDRFIQGSEVQN
PYSFYHWQYIDIFVYFSHHTVTIPPVCWTNAAHRHGVCVLGTFITEWQEGGRLCEAFLAGDEPSFQAVAD
RLVQIAQFFRFDGWLINIENSLTPAAVRNTPLFLQYLTAQLHQQVPGGLVLWYDSVVQSGQLKWQDELND
QNRVFFDSCDGFFTNYNWREDHLQRMVAQAGERLADVYVGVDVFARSNVVGGRFDTDKSLELIRKHGFSA
ALFAPGWVYECLEKSDFFQNQDKFWSLLERFLPTHSICSLPFVTSFCLGLGTRRVCYGKEQAVGPWYHPS
AQETQPLFGEHKLAGDSRGWVKTHCCLTDAWHGGSSLLLRGLIPPEVDSVAVRLFSLHIPVPPKVFLSMV
YKFEGSTDVQVALELTTGDASSCHVGGMLVLNETGSRHSPRPLRVPPTRLARWASSCGQQLSGGWIQRCY
EVNLRGCLLQDLLVSFSRPPGSREEESFICRLGEIQVVDASSLLAPLPRVQNVTISQIRWLPLITGSEGL
PTRLLLSCTLHWSYLLLRARCFRIHCWKRTGSSSSVAESPETEKPTFLGLAFANQYRVVDLAVEAAGFGQ
DGRVEFLVEPVPREGFLVPQAEWGKAVLLFSVPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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