NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS25121.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25121.1 Public Mus musculus 11 Evi2b 23 108 98 CCDS HistoryNCBI Gene:216984Re-query CCDS DB by CCDS ID:25121.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25121.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000170422.3 ENSMUSP00000128569.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000170422.3Link to Ensembl Protein Viewer:ENSMUSP00000128569.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000170422Re-query CCDS DB by Protein ID:ENSMUSP00000128569
Original member Current member EBI ENSMUST00000179322.1 ENSMUSP00000136153.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000179322.1Link to Ensembl Protein Viewer:ENSMUSP00000136153.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000179322Re-query CCDS DB by Protein ID:ENSMUSP00000136153
Original member Current member NCBI NM_001077496.1 NP_001070964.1 Accepted alive Link to Nucleotide Sequence:NM_001077496.1Link to Protein Sequence:NP_001070964.1Re-query CCDS DB by Nucleotide ID:NM_001077496Re-query CCDS DB by Protein ID:NP_001070964Link to BLAST:NP_001070964.1
Original member NCBI NM_146023.4 NP_666135.1 Removed alive Link to Nucleotide Sequence:NM_146023.4Link to Protein Sequence:NP_666135.1Re-query CCDS DB by Nucleotide ID:NM_146023Re-query CCDS DB by Protein ID:NP_666135Link to BLAST:NP_666135.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001070964.1 444 Q8VD58 444 100% 0 0
NP_666135.1 444 Q8VD58 444 100% 0 0

Chromosomal Locations for CCDS 25121.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 79515413 79516747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1335 nt):
ATGGAATTCAAGTATCTGGTCTTCATTGTGCTTTGTCAATACCTGGACAATACGTTTTTCTCAGAGACAG
AA
GCAATTACAACAGAGCAGCAATCACTGTCTACTTTAATCACACCGTCGTTATATGTTACAACTGATTC
T
CAAAACACAGCAGGGAATGCTTTGAGTCAGACAACAAGATTCAAGAACATTTCTTCTGGACAGCAAGCA
TCA
CCTGCCCAAATCACTCCTGAACAAGCAACACCAGCTGTTTATGTCTCTTCAAGCCCACTTACTTATA
AC
ATTACCAGACAAGCAGAATCAGCGGTCAACAACTCCTTGCCTCAAACATCACCATCTGGGTTCACTTT
G
ACCAATCAGCCATCACCTTCTACCTATAATTCTACTGGACAACCACCAAAACATCTTGTCTATACTTCC
ACA
CAACAGCCACCATCACCTGCTCCTACCTCTTCTGGAAAACCAGAAGTAGAGTCTACTCATAATCAGC
CC
ACAAAATCAACACCAACTATTTATTTACAAAGGGACACACCACCACCACCACCACCACCACTCACTTC
A
GAACCACCAAGTGGCAAAGGAACTGCTCATAAAAACAACCACAATGCAATTGCTGCCATATTAATCGGT
ACT
ATTATAATTTCTATGTTGGTAGCTATACTCATGATTATACTGTGGAAATACTTGAGGAAGCCAGTCT
TA
AATGATCAAAACTGGGCAGGTAGGTCTCCATTTGCTGATGGAGAAACACCAGAAATGTGTATGGATAA
C
ATCAGAGAGAGTGAGGCATCCACAAAGCGTGCATCAGTTGTCTCACTTATGACCTGGAAACCAAGTAAA
AGC
ACACTGCTAGCAGATGATTTAGAAGTTAAGTTGTTTGAATCAAGTGAACACATTAATGATACCAGCA
AC
CTCAAGACTGATAATGTAGAAGTTCAAATAAATGGCTTATCAGAAGACAGTGCTGATGGGTCAACAGT
T
GGTACAGCCGTGTCTTCAGATGATGCAGATCTGGCCCTGCCACCTCCCCTTCTTGATTTGGATGAGAAC
CTA
CCAAACAAGCCCACAGTGACAGTTGTATCTCCTTTACCAAATGATTCTATCAATCCCCAACCATCTC
CA
GATGGTCTAAATCAAGTGTGTGAAGAACAGCATTCCAAGATCCAAGAGCCATTCCCGCCACCCCCTGA
C
TCATTTAATGTGCCTCTGTCAGCAGGAGATTTTATAAACAATCAAGAGTCGGCCCACGAGGCTCAATGC
CAG
GAGTTCTCTACTCCTGACCTCCATCCAGACCTCACAGACTCCCTGCCACCTCCACCTACAGAGCTGC
TG
TAA


Translation (444 aa):
MEFKYLVFIVLCQYLDNTFFSETEAITTEQQSLSTLITPSLYVTTDSQNTAGNALSQTTRFKNISSGQQA
S
PAQITPEQATPAVYVSSSPLTYNITRQAESAVNNSLPQTSPSGFTLTNQPSPSTYNSTGQPPKHLVYTS
T
QQPPSPAPTSSGKPEVESTHNQPTKSTPTIYLQRDTPPPPPPPLTSEPPSGKGTAHKNNHNAIAAILIG
T
IIISMLVAILMIILWKYLRKPVLNDQNWAGRSPFADGETPEMCMDNIRESEASTKRASVVSLMTWKPSK
S
TLLADDLEVKLFESSEHINDTSNLKTDNVEVQINGLSEDSADGSTVGTAVSSDDADLALPPPLLDLDEN
L
PNKPTVTVVSPLPNDSINPQPSPDGLNQVCEEQHSKIQEPFPPPPDSFNVPLSAGDFINNQESAHEAQC
Q
EFSTPDLHPDLTDSLPPPPTELL




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser