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Report for CCDS24636.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24636.1 Public Mus musculus 11 Adamts2 23 108 98 CCDS HistoryNCBI Gene:216725Re-query CCDS DB by CCDS ID:24636.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24636.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040523.8 ENSMUSP00000040171.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040523.8Link to Ensembl Protein Viewer:ENSMUSP00000040171.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000040523Re-query CCDS DB by Protein ID:ENSMUSP00000040171
Original member Current member NCBI NM_175643.3 NP_783574.1 Accepted alive Link to Nucleotide Sequence:NM_175643.3Link to Protein Sequence:NP_783574.1Re-query CCDS DB by Nucleotide ID:NM_175643Re-query CCDS DB by Protein ID:NP_783574Link to BLAST:NP_783574.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_783574.1 1213 Q8C9W3 1213 100% 0 0

Chromosomal Locations for CCDS 24636.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 50602164 50602299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50603237 50603631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50667991 50668150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50737166 50737368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50756696 50756779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50773217 50773373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50775314 50775419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50776119 50776262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50776622 50776754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50777131 50777244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50779693 50779838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50781705 50781880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50784603 50784736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50785548 50785671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50786586 50786666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50787189 50787355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50788655 50788814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50791803 50791935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50792646 50792853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50795318 50795447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50796439 50796528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 50803569 50804029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3642 nt):
ATGGATCCGCCGGCGGGAGCCGCTCGCCGCCTGCTCTGCCCCGCTCTACTGCTGCTGCTGCTGCCGCCGC
CGCCTCTCCTGCTGCTGCCGCCGCCGCCCGCGAGCGTCCGGCTCGTCGCCGCCACCGAGCCCCCAGGCGG
GCCCCCGGGGCAAGGAGCCGAGCGCATCCTGGCGGTGCCGGTGCGCACTGACGCCCAGGGCCGCTTGGTG
TCCCACGTGGTGTCTTTGGAGACGGCCGGGGCGGGGGTACGAGCCCGCAGAGCTGCCCTGGACCAGACCT
CGGGCTTGCCCGGAGGCGCTGCTCAGGACCCTGGAGGACGCCTTTTCTACAACCTCACAGTATTCGGCCG
AGACCTGCACCTGCGGCTGCGGCCCAACGCCCGGCTCGTGGCTCCGGGGGCCACCGTGGAGTGGCAGGGT
GAGACGGGTGACACCCGAGTGGAGCCCCTGCTTGGGAGCTGTCTCTACGTTGGAGACGTGGCAGACTTAC
CTAAAGCCTCCTCGGTGGCGCTCAGTAACTGTGATGGGCTGGCTGGTCTGATCCGGATGGAGGAGGAGGA
GTTCTTTATCGAACCTCTGGAGAAGGGGCAGACGGATCAGGAGGCTGAACAAGGCCGAGTGCATGTGGTA
TATCGCCGACCGCCCACTCCCAAGCCCCCTCCTGTGAGCGAACCACAGGCTCTGGACACAGGAGTCTCCC
AGGGCAACCTGGACAGCCTCAGCAGAGCCCTAGGCGTCCTGGAGGAGCGCATCAACAGCTCACGGCGGAG
GGTGCGCAGGCATGCCACGGACGATGACTACAACATTGAGGTCCTGCTGGGTGTGGATGACTCGGTGGTC
CAGTTCCATGGGAAGGAGCACGTGCAGAAGTACCTGCTGACACTCATGAACATTGTCAACGAAATCTACC
ATGATGAGTCGTTGGGGGCCCACATCAATGTGGTGCTGGTGAGGATTATCCTGCTGAGCCACGCAAAGTC
CATGAGCCTCATTGAGATTGGAAACCCCTCTCAGAGTCTGGAGAATGTCTGCCGATGGGCCTACCTCCAG
CAGAAGCCGGACACAGACCACGATGAGTACCACGACCATGCCATCTTTCTCACACGGCAGGATTTTGGGC
CCTCGGGCATGCAAGGCTATGCTCCCGTCACCGGGATGTGCCACCCTGTCCGCAGCTGTACTCTGAACCA
TGAAGATGGCTTCTCCTCGGCATTTGTGGTGGCTCACGAGACGGGCCATGTGCTGGGCATGGAGCATGAC
GGGCAAGGCAACCGCTGCGGTGACGAGGTGCGGCTGGGCAGCATCATGGCCCCCCTGGTACAGGCTGCCT
TCCATCGCTTCCACTGGTCCCGCTGCAGCCAGCAGGAGCTCAGCCGCTACCTGCATTCCTATGACTGCCT
GCGGGATGATCCCTTCGCCCACGACTGGCCAGCATTGCCTCAACTCCCAGGGCTTCACTATTCCATGAAC
GAGCAGTGTCGCTTTGACTTTGGCCTGGGTTACATGATGTGCACTGCGTTCCGGACCTTCGACCCCTGCA
AACAGCTCTGGTGCAGCCACCCAGACAACCCCTACTTTTGCAAGACAAAGAAGGGTCCTCCACTGGATGG
TACTATGTGTGCGCCTGGCAAGCACTGCTTCAAAGGCCACTGCATCTGGCTGACACCCGATATCCTCAAA
CGAGACGGCAACTGGGGTGCCTGGACTCCGTTTGGCTCCTGCTCACGCACCTGTGGCACAGGCGTGAAGT
TCAGGACCCGCCAGTGTGACAACCCACATCCAGCCAATGGGGGCCGCACCTGCTCGGGCCTGGCCTATGA
CTTCCAGCTCTGCAACCCCCAGGACTGTCCCAATTCCCTGGCTGACTTCCGGGAGGAGCAGTGTCAGCAG
TGGGACCTGTACTTTGAGCACGGTGATGTCCAGCACCACTGGCTGCCTCATGAGCACCGGGATGCCAAGG
AGAGATGCCACCTCTACTGTGAGTCCAAGGAGACAGGGGAGGTGGTGTCTATGAAGCGCATGGTGCACGA
TGGAACACGCTGCTCCTACAAGGACGCCTTCAGCCTGTGTGTGCGTGGGGACTGCAGGAAAGTGGGATGT
GATGGGGTGATCGGGTCCCGTAAGCAGGAAGACAAGTGTGGCGTGTGTGGAGGCGACAACACCCACTGTA
AAGTGGTGAAGGGCACATTCACGAGGTCACCGAGGAAACAAGATTACATCAAGATGTTTGAGATCCCCGC
AGGAGCCAGACACCTGCTCATCCAGGAGGCCGACACCACCAGCCACCATCTGTCTGTCAAGAACCTGGAG
ACAGGCAAGTTCATCTTAAATGAAGAGAACCACTTGGACCCCAATTCTAGATCCTTCATTGCCATGGGTG
TGGAGTGGGAATACAGGAACGAGGACGAGAGGGAGACGCTGCAGACCATAGGCCCACTCCACGGAACCAT
CACCGTGCTGGTTATTCCTGAAGGAGACACCAGGATCTCACTGACATACAAATACATGATTCACGAGGAC
TCCCTCAATGTTGACGACAACAATGTCCTGGAAGATGATGCTGTGCGCCACGAGTGGGCCCTGAAGAAGT
GGTCTCCCTGCTCCAAGCCCTGCGGTGGAGGGTCCCAGTTCACTAAGTATGGCTGCCGCCGGAGGTTGGA
CAGCAAGATGGTACACCGAGCCTTCTGCAGTGCCCTCGCCAAGCCCAAGGCCATCCGACGAGCCTGCAAC
CCTCAGGAGTGCTCCCAGCCTGTGTGGGTCACCGGTGAATGGGAGCCTTGTACTCAAAGCTGTGGGCGAA
CTGGCATGCAGGTGCGCTCCGTCCGCTGTATACAACCTCTGCACAACAACACCACCCGCTCCGTGCACAC
CAAACACTGCAACGATCACCGTCCCGAGAGCCGCCGGGCCTGCAACCGTGAGCTCTGCCCTGGGCGGTGG
CGGGCTGGGTCCTGGTCCCAGTGTTCGGTAACCTGTGGCAACGGCACCCAGGAACGGCCAGTGCTCTGTC
GCACTGCAGATGATAATTTTGGTGTCTGCCGGGAGGAGCGACCGGAGACGGCAAGGATCTGCAGGCTTGC
ACCCTGTCCCCGAAACGGCTCAGATCCCTCCAAGAAGAGCTACGTGGTTCAGTGGCTGTCCCGGCCTGAT
CCTGACTCACCTATCCAGAAGATCTCGTCAAAGGACCAGTGCCAAGGCGACAAGTCAATGTTCTGTAGGA
TGGAAGTCTTGTCTCGCTACTGCTCCATCCCCAGCTACAACAAGCTTTGCTGCAAGTCCTGCAACCCGCC
CCGAAACCTCAGCAACACAGAGGACGGAGGTGTGGAGCCTCCTCCCGGGAAGCACAATGACATCGATGTG
TTCATGCCCACACTCCCGGGGCCCACTGTAGCTACACAGGTGCAGCCTTCTCCGGGGCCTCCTTTGGAGG
CTCCCCTCAATGTCTCTAGCACCAATGCCACTGAAGATCACCCAGAAACCAATGCTGTGGATGTCCCCTA
CAAAATCCATGGTGTGGATGAAGAGGTCCCGTCTCCTAACCTGATCCCTCGACGGCCAAGCCTGTATGTA
AAGACAAGGAACCAAAGAATCCAGGAGCTCATTAATGCAGTGCAGAGGAAAGAGAAGCCGGGAAAGTTCT
AA

Translation (1213 aa):
MDPPAGAARRLLCPALLLLLLPPPPLLLLPPPPASVRLVAATEPPGGPPGQGAERILAVPVRTDAQGRLV
SHVVSLETAGAGVRARRAALDQTSGLPGGAAQDPGGRLFYNLTVFGRDLHLRLRPNARLVAPGATVEWQG
ETGDTRVEPLLGSCLYVGDVADLPKASSVALSNCDGLAGLIRMEEEEFFIEPLEKGQTDQEAEQGRVHVV
YRRPPTPKPPPVSEPQALDTGVSQGNLDSLSRALGVLEERINSSRRRVRRHATDDDYNIEVLLGVDDSVV
QFHGKEHVQKYLLTLMNIVNEIYHDESLGAHINVVLVRIILLSHAKSMSLIEIGNPSQSLENVCRWAYLQ
QKPDTDHDEYHDHAIFLTRQDFGPSGMQGYAPVTGMCHPVRSCTLNHEDGFSSAFVVAHETGHVLGMEHD
GQGNRCGDEVRLGSIMAPLVQAAFHRFHWSRCSQQELSRYLHSYDCLRDDPFAHDWPALPQLPGLHYSMN
EQCRFDFGLGYMMCTAFRTFDPCKQLWCSHPDNPYFCKTKKGPPLDGTMCAPGKHCFKGHCIWLTPDILK
RDGNWGAWTPFGSCSRTCGTGVKFRTRQCDNPHPANGGRTCSGLAYDFQLCNPQDCPNSLADFREEQCQQ
WDLYFEHGDVQHHWLPHEHRDAKERCHLYCESKETGEVVSMKRMVHDGTRCSYKDAFSLCVRGDCRKVGC
DGVIGSRKQEDKCGVCGGDNTHCKVVKGTFTRSPRKQDYIKMFEIPAGARHLLIQEADTTSHHLSVKNLE
TGKFILNEENHLDPNSRSFIAMGVEWEYRNEDERETLQTIGPLHGTITVLVIPEGDTRISLTYKYMIHED
SLNVDDNNVLEDDAVRHEWALKKWSPCSKPCGGGSQFTKYGCRRRLDSKMVHRAFCSALAKPKAIRRACN
PQECSQPVWVTGEWEPCTQSCGRTGMQVRSVRCIQPLHNNTTRSVHTKHCNDHRPESRRACNRELCPGRW
RAGSWSQCSVTCGNGTQERPVLCRTADDNFGVCREERPETARICRLAPCPRNGSDPSKKSYVVQWLSRPD
PDSPIQKISSKDQCQGDKSMFCRMEVLSRYCSIPSYNKLCCKSCNPPRNLSNTEDGGVEPPPGKHNDIDV
FMPTLPGPTVATQVQPSPGPPLEAPLNVSSTNATEDHPETNAVDVPYKIHGVDEEVPSPNLIPRRPSLYV
KTRNQRIQELINAVQRKEKPGKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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