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Report for CCDS72201.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72201.1 Public Mus musculus 9 Kri1 23 108 98 CCDS HistoryNCBI Gene:215194Re-query CCDS DB by CCDS ID:72201.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72201.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038671.9 ENSMUSP00000039688.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038671.9Link to Ensembl Protein Viewer:ENSMUSP00000039688.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000038671Re-query CCDS DB by Protein ID:ENSMUSP00000039688
Original member Current member NCBI NM_145416.3 NP_663391.2 Accepted alive Link to Nucleotide Sequence:NM_145416.3Link to Protein Sequence:NP_663391.2Re-query CCDS DB by Nucleotide ID:NM_145416Re-query CCDS DB by Protein ID:NP_663391Link to BLAST:NP_663391.2

Chromosomal Locations for CCDS 72201.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 21273921 21274248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21275269 21275367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21275437 21275501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21275844 21275974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21276055 21276181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21276385 21276473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21276560 21276635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21279361 21279531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21280164 21280259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21280363 21280489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21281042 21281169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21281662 21281739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21281815 21281911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21282049 21282098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21282174 21282228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21285241 21285367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21286579 21286684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21287699 21287772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21287860 21287953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2118 nt):
ATGCCGGAACCGCGCGCCTCTGGGTGCCTAAAGGTGAACGCAGCGTTTGCTGCGCGCTACAGCCGTTACC
GCGAGCGTGAGGAACTTCAGCGACTGAAAGATCGCTATGGAGATCCGGACGTCGGTGGCGACTCCAGTTC
CGAGTCTGACTCCAGCGATGAGCATGTGGAATTTGATCCCCAGCAGGAGAGAGACTTTTACAGGACTCTG
TCCTTGCTGAAGAAGAAGGACCCTCGAATTTACCAGAAAGATGCTACCTTCTATCAGAGAACAGCCGAAG
CCTCATCTTCAGAGAGTGAGGAGGAGCCGCCAGCAGCCTTGGGGAAGCAGGAGAAGCAGCAGAAGCAGCA
GCCCATGTACCTGAAGGACTATGAGAGGAAGGTCATCTTGGAGAAAGGAGGCAAATATGTGGACGAGGAC
AACTCTGATGGGGAGACCGTTGACCACAGGCTCCAGGAAACATCCACAAAGAGTTATGTAGAAGAGCAGA
AACAGCTGAAGGAAAGCTTCCGGGCTTTTGTGGAGGACAGCAGTGATGAGGACAGTGCCGGGGAAGGTGG
CTCAGGGTTGCTGCAGAAGCACACGAAGAGTCGGGAAGAGAAGGCCCAGGAGGAAGTGGACTACCTTGAG
TGGCTAAAGGGGCAAAAGGACATGGACAGCTCCGAGTCGCTGAAAGAACTGACACACCTGAAGGAATACT
GGAACAACCCAGGACTGGACAAGGGGGAACAGTTCCTGAGGGATTATATCCTCAACAAACGCTATGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAAGGGGCTCCAGGCCCCCCAGTCCAGCTGGCAGTG
GACGACTCCTCAGATGAAGGGGAGCTATTCCTGAAGAAGCAGGAAGACTTTGAACACAAGTACAACTTCC
GCTTTGAGGAGCCTGACTCAGCCTCAGTCAAGACATACCCGCGAAGCATCGCATCATCTGTGCGCCGCAA
AGATGAGCGCAGGAAGGAGAAGCGGGAAGAGACGAGGGAGCGGAAGAAGAGGGAGAAGGCCAGGAAGCAG
GAGGAGCTGAAACAGTTAAAGAACCTAAAGAGGAAGGAGATTCTGGCCAAGCTGGAGAAGCTGCGACAGG
CCACTGGTAACGAGACCCTGGGCCTTGAGGAGCAGGACCTGGAGGCTGACTTTGACCCCGCCCAGCACGA
CCAGCTCATGCAGAAATGTTTTGGAGATGCCTTCTATGGTACTGCGGAGGAAGAGAAGCCACAGTTTGAG
GAAGAGGACGGGCTAGAAGATGACTGGAACTGGGACATGTGGGGTGGACCCGAGCAAGATGGGGCCTGGA
GCCAACAGGAGCTGCACTGTGAGGACCCTGACTTTAACATGGATGCAGACTATGACCCCAGCCAACCACG
GAAGAAGCTTCGTGAGGCCCCCACCTCAGGCAAGAGAAAGCGCAAGTCTCCATTTGCAGCTGCAGTGGGG
CAGGAGAAGCCCATGTTTGACCCTGGGGACAAGACCTTTGAGGAGTACCTAGATGAGTACTACCGTCTGG
ACTACGAGGACATTATCGACGACCTGCCCTGTCGTTTCAAGTACCGCACTGTGGTGCCCTGCGACTTCGG
GCTCAGCACAGAGGAGATCCTTTCAGCTGATGACAAGGAACTGAATCGCTGGTGTTCCCTGAAGAAGACC
TGCATGTACAGGTCGGAGCAGGAGGAGATGCAGGAGCAGCGGGTGTACAGCCAGAAGGCCCAGAACATGT
GGAAGAAGAGGCAGATCTTCAAGTCTCTGTGCCAGGAAGAGATGGAAATGTCCACAGAAGCCACAGGAAA
GTCACAGAGCAAGGCCAGCCCACAAGTACAGTTGTTCACACCCAATGGAGCTGACCAGAAGACACCCCAG
GCTGAGACCTTAGTATCCAAGGAAGAGGGGTTGGCCCACACATCCTGCCCAGAGAAGCCAGCATCCCAGA
AGCAGAAGAGCAAGAAGGCCAGGCTGCTGGGTCCCACGGTGACACTTGGAGGTCACAAGTTCAGCAGACA
GAGATTGCAGGCCTTTGGTCTCAACCCCAAAAGGCTGCACTTCCGCCAGTTAGGCCGCCAACGGAAGAAA
CAGCAGAGCCACTCCTGA

Translation (705 aa):
MPEPRASGCLKVNAAFAARYSRYREREELQRLKDRYGDPDVGGDSSSESDSSDEHVEFDPQQERDFYRTL
SLLKKKDPRIYQKDATFYQRTAEASSSESEEEPPAALGKQEKQQKQQPMYLKDYERKVILEKGGKYVDED
NSDGETVDHRLQETSTKSYVEEQKQLKESFRAFVEDSSDEDSAGEGGSGLLQKHTKSREEKAQEEVDYLE
WLKGQKDMDSSESLKELTHLKEYWNNPGLDKGEQFLRDYILNKRYEEEEEEEEEEEEEEGAPGPPVQLAV
DDSSDEGELFLKKQEDFEHKYNFRFEEPDSASVKTYPRSIASSVRRKDERRKEKREETRERKKREKARKQ
EELKQLKNLKRKEILAKLEKLRQATGNETLGLEEQDLEADFDPAQHDQLMQKCFGDAFYGTAEEEKPQFE
EEDGLEDDWNWDMWGGPEQDGAWSQQELHCEDPDFNMDADYDPSQPRKKLREAPTSGKRKRKSPFAAAVG
QEKPMFDPGDKTFEEYLDEYYRLDYEDIIDDLPCRFKYRTVVPCDFGLSTEEILSADDKELNRWCSLKKT
CMYRSEQEEMQEQRVYSQKAQNMWKKRQIFKSLCQEEMEMSTEATGKSQSKASPQVQLFTPNGADQKTPQ
AETLVSKEEGLAHTSCPEKPASQKQKSKKARLLGPTVTLGGHKFSRQRLQAFGLNPKRLHFRQLGRQRKK
QQSHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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