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Report for CCDS3038.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3038.1 Public Homo sapiens 3 UROC1 24 110 108 CCDS HistoryNCBI Gene:131669Re-query CCDS DB by CCDS ID:3038.1Re-query CCDS DB by GeneID:131669See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3038.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000290868.7 ENSP00000290868.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000290868.7Link to Ensembl Protein Viewer:ENSP00000290868.2Re-query CCDS DB by Nucleotide ID:ENST00000290868Re-query CCDS DB by Protein ID:ENSP00000290868
Original member Current member NCBI NM_144639.3 NP_653240.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144639.3Link to Protein Sequence:NP_653240.1Re-query CCDS DB by Nucleotide ID:NM_144639Re-query CCDS DB by Protein ID:NP_653240Link to BLAST:NP_653240.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653240.1 676 Q96N76-1 676 100% 0 0

Chromosomal Locations for CCDS 3038.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 126482345 126482485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126483369 126483468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126488198 126488279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126489276 126489375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126492418 126492516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126496038 126496108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126498051 126498172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126499337 126499409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126500057 126500154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126500695 126500874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126501218 126501280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126503995 126504083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126505701 126505844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126505945 126506011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126507742 126507803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126507967 126508095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126508416 126508475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126509585 126509678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126510664 126510794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 126517594 126517719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2031 nt):
ATGTCTAGCCTCCAGGCGCTGTGCTCTGGCCTGCCCCTGCGGCCCCTCCCAGAGAACCGGGGACGCCAGG
CTGGGGTGCCCCATGCCCCTGTCAGGACCCCCAGCCTCAGCCCTGTGGAGAAACAGCTGGCGCTGAGGAA
CGCCCTGCGCTACTTCCCCCCGGATGTCCAGGAGCTGCTGGCCCCAGAGTTTGCCCAGGAGCTGCAACTG
TACGGACACATCTACATGTACCGGTTTTGCCCCGACATTGAAATGAGGGCCTACCCGATTGAGCAGTACC
CCTGCCAGACGAAAGTGGCTGCCGCCATCATGCACATGATTATGAACAACCTGGATCCTGCCGTGGCCCA
GTTTCCCCAGGAGCTGGTGACCTATGGAGGAAATGGGCAGGTGTTCAGCAACTGGGCTCAGTTCTGGCTG
ACCATGTTCTACTTGTCGAAGATGACAGAGGAGCAGACTTTGGTCATGTACAGTGGGCACCCACTTGGCC
TCTTTCCCAGCAGCCGCAGTGCCCCACGGCTCGTCATCACCAATGGGATGGTCATTCCCAACTACTCCTC
CCGGACGGAGTATGAGAAGCTCTTTGCCTTGGGGGTTACAATGTACGGCCAGATGACAGCAGGTAGCTAC
TGCTACATCGGTCCCCAGGGAATCGTTCATGGCACTGTGCTCACCGTGTTGAATGCTGCACGTCGGTACC
TGGGCATCGAGGACTTGGCTGGGAAGGTCTTTGTCACCTCTGGGCTCGGCGGAATGAGTGGGGCTCAGGC
CAAGGCCGCAGTCATCGTGGGGTGCATCGGTGTGATAGCAGAGGTGGATAAAGCAGCCCTTGAGAAACGC
CACAGGCAGGGCTGGCTGATGGAAGTGACTGACAGCTTGGACCGCTGCATCCAGAGGCTCAGGGAAGCAA
GGAAAAAAAAGGAGGTGCTCAGCCTTGGTTACCATGGCAACGTGGTGGCTCTTTGGGAGCGCCTGGTCCA
CGAATTGGACACGACGGGGGAGTGCTTGGTGGACCTGGGGTCAGATCAGACATCCTGCCACAACCCGTTC
AATGGCGGCTACTACCCTGTGCAGCTCAGCTTCACGGAGGCCCAGAGCCTCATGGCCTCCAACCCTGCTG
TGTTCAAGGACCTGGTCCAGGAAAGCCTGAGGAGGCAAGTCTCAGCCATCAACAGGTTGGCCGAGGAGAA
GTTCTTCTTCTGGGACTACGGCAATGCCTTCCTCTTGGAGGCCCAGAGAGCAGGAGCGGATGTGGAGAAG
AAAGGTGCTGGCAGGACAGAGTTCCGCTACCCTTCCTATGTGCAGCACATCATGGGGGACATATTCTCCC
AGGGATTTGGGCCTTTCCGCTGGGTGTGCACATCGGGGGACCCCCAGGACCTGGCGGTCACAGACGAACT
GGCCACATCTGTGCTGGAGGAAGCCATTGCTGATGGAGTGAAGGTGTCTGTGAAGCTGCAGTACATGGAC
AACATCCGCTGGATCCGGGAGGCCGCCAGGCACCGGCTGGTGGTGGGCTCCCAGGCAAGGATCCTGTACT
CAGACCAGAAGGGCCGCGTGGCCATCGCTGTGGCCATTAACCAGGCCATCGCCTGCAGGAGGATCAAGGC
GCCGGTGGTCCTGAGCCGAGATCACCATGACGTGAGCGGCACCGACAGCCCCTTTAGGGAGACCTCCAAC
ATTTACGACGGCTCTGCCTTCTGTGCAGACATGGCTGTGCAGAACTTCGTGGGAGATGCCTGTCGCGGAG
CCACCTGGGTCGCCCTTCACAACGGAGGGGGCGTGGGCTGGGGTGAGGTGATCAACGGGGGATTCGGCCT
CGTGCTGGACGGTACCCCGGAGGCCGAGGGGAGAGCCAGGCTGATGCTCAGCTGGGATGTCTCCAATGGT
GTGGCCCGGCGCTGCTGGTCAGGGAACCAGAAGGCCTATGAGATCATCTGCCAGACCATGCAGGAGAACA
GCACCTTGGTGGTGACACTGCCTCACAAGGTGGAGGACGAGCGGGTGCTCCAGCAGGCCCTGCAGCTCTG
A

Translation (676 aa):
MSSLQALCSGLPLRPLPENRGRQAGVPHAPVRTPSLSPVEKQLALRNALRYFPPDVQELLAPEFAQELQL
YGHIYMYRFCPDIEMRAYPIEQYPCQTKVAAAIMHMIMNNLDPAVAQFPQELVTYGGNGQVFSNWAQFWL
TMFYLSKMTEEQTLVMYSGHPLGLFPSSRSAPRLVITNGMVIPNYSSRTEYEKLFALGVTMYGQMTAGSY
CYIGPQGIVHGTVLTVLNAARRYLGIEDLAGKVFVTSGLGGMSGAQAKAAVIVGCIGVIAEVDKAALEKR
HRQGWLMEVTDSLDRCIQRLREARKKKEVLSLGYHGNVVALWERLVHELDTTGECLVDLGSDQTSCHNPF
NGGYYPVQLSFTEAQSLMASNPAVFKDLVQESLRRQVSAINRLAEEKFFFWDYGNAFLLEAQRAGADVEK
KGAGRTEFRYPSYVQHIMGDIFSQGFGPFRWVCTSGDPQDLAVTDELATSVLEEAIADGVKVSVKLQYMD
NIRWIREAARHRLVVGSQARILYSDQKGRVAIAVAINQAIACRRIKAPVVLSRDHHDVSGTDSPFRETSN
IYDGSAFCADMAVQNFVGDACRGATWVALHNGGGVGWGEVINGGFGLVLDGTPEAEGRARLMLSWDVSNG
VARRCWSGNQKAYEIICQTMQENSTLVVTLPHKVEDERVLQQALQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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