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Report for CCDS51099.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51099.1 Public Mus musculus 3 Erich3 23 108 98 CCDS HistoryNCBI Gene:209601Re-query CCDS DB by CCDS ID:51099.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 51099.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051862.7 ENSMUSP00000062837.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051862.7Link to Ensembl Protein Viewer:ENSMUSP00000062837.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000051862Re-query CCDS DB by Protein ID:ENSMUSP00000062837
Original member Current member NCBI NM_175176.3 NP_780385.1 Accepted alive Link to Nucleotide Sequence:NM_175176.3Link to Protein Sequence:NP_780385.1Re-query CCDS DB by Nucleotide ID:NM_175176Re-query CCDS DB by Protein ID:NP_780385Link to BLAST:NP_780385.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780385.1 517 F6QRE9-2 517 100% 0 0

Chromosomal Locations for CCDS 51099.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 154711319 154711330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 154713874 154714092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 154720099 154720279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 154727394 154727580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 154733322 154733626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 154739093 154739317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 154748319 154748743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1554 nt):
ATGTTTGCCAAGGGAAAGAAGGCAATGATGAAATTCAGGAACTACATGGACCATTCCCAGAAGGAGGATC
TCTACCAACTCCCACACATTAACAGTTACCACACACCTGTTCCTCCAACACCGCAGCCCCAAGCAGGAAA
GAACTTCAGGGATAAGAGGTTGGAATCTTGGAGGAGGAAGAGGCTGCGTCCCATCACGGCTCCCAATGGC
CTTGAGCCTCTCTTTGCCAAGGATCCTGGAAGGATTTATAAAACAGCGCCGCATAGCAATGCAGTTATCA
CAATGGTCTATTTTGGGAAAAATGTGCACCTATCTTATGATGACATAGACTTCCGAGATGAAATCAAGAT
TTACCAACAGCACTGTGGAGGAGAGAACCTTTGTGTCTACAAAGGGAAACTGCTTGAGAAAGACACCTTT
CAGTTTATCTCCAAGCGTCACCACGGCTTCCCCTTCAGCCTCACCTTCTTTCTGAACGGGATTCAGGTGA
ACAGGATCAGCTCCTGCTGCGAGTTCAAGCACCGTAGAAGCACCCGCCTAGGAGGCAAGAGAGGCTACTT
CGGGTTCGTGTGTGTGGAGAAGGCATCTCCTTGCTACAGGTGCATTATTGCAATGGGCCTTGACAGAAAA
CCATCTTCAACGAAACCTAAGAAGGAAAAGATTACTGAGAAAAAGGAGGAGCCACCAAACAAGAGTCAGG
GAAAACTGAGGAAGGACAGAATGAATGCACCATCGAAAAGGAACGAGATGGAGAGGAAAGAGTCTTGTGT
CTCAGCTGCATTTTCAGCTGAGGAAATAAAATTAGGGGTCAAAGAAGTGAGGACGGCTATTGAGGAAATG
GAATGGAAGGGGAAGTCAGGACGAGACGTCTGGGAAGAGGACCAGGACAACGCTGTTAAATACGACTATG
AAGAAGATTTTGAGGTAGATGATGAAAAACAAGACGAGAAGGTGGATGAAGATGAGGACCAGGCTGATGA
CCAGATGAGTGGAGGATCCAAGACACCCACCGAAAGTGAAAAAGACAACCGGAACCCCGAAAAGAAAATT
GAAACCTCTTCAGAGAAGGCCCATGACAGTGAGAATGAGGATACTGGATGCTCGGACAGCGAAGAGGATG
ACAGACAAGATGTTAAAACCATGTCATCAATCTCATCTAGAAGTCACCCCTACTCTAGCGAAAGTGAAGA
CGATTCTACAGAGGTGGGCGGGGAAGCCGACTCTGTCAGCGAAGAGGGAAGCTCCAGAAGTTCCTCTTCT
CAGGATCTGCGGGAAAATGATGACCCAGGAAAACCACACTTTCCAATCGAGAAGTACTTGGAAACTGAGA
TCGAAGAGCAAGAAATCACCGAGGGGCATAACGGACCTTGGTTGACCGAGCTCAGCGGTATGCATGTTAC
TGAGGGAAAACCAACTATGGGAATCCAAGCTTTATCGGAGAGTGAACACAAGGAGCCTAGGCGGGTGGCT
TCTTCAGAGGTGAGGGCTAAGAGTCAGCTCCAGAAGGAAGCAGGCCTCCCTGGGGTGGAAGAAGAGGGTA
AGTACAGCCCATGA

Translation (517 aa):
MFAKGKKAMMKFRNYMDHSQKEDLYQLPHINSYHTPVPPTPQPQAGKNFRDKRLESWRRKRLRPITAPNG
LEPLFAKDPGRIYKTAPHSNAVITMVYFGKNVHLSYDDIDFRDEIKIYQQHCGGENLCVYKGKLLEKDTF
QFISKRHHGFPFSLTFFLNGIQVNRISSCCEFKHRRSTRLGGKRGYFGFVCVEKASPCYRCIIAMGLDRK
PSSTKPKKEKITEKKEEPPNKSQGKLRKDRMNAPSKRNEMERKESCVSAAFSAEEIKLGVKEVRTAIEEM
EWKGKSGRDVWEEDQDNAVKYDYEEDFEVDDEKQDEKVDEDEDQADDQMSGGSKTPTESEKDNRNPEKKI
ETSSEKAHDSENEDTGCSDSEEDDRQDVKTMSSISSRSHPYSSESEDDSTEVGGEADSVSEEGSSRSSSS
QDLRENDDPGKPHFPIEKYLETEIEEQEITEGHNGPWLTELSGMHVTEGKPTMGIQALSESEHKEPRRVA
SSEVRAKSQLQKEAGLPGVEEEGKYSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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