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Report for CCDS1563.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1563.1 Public Homo sapiens 1 PRSS38 24 110 108 CCDS HistoryNCBI Gene:339501Re-query CCDS DB by CCDS ID:1563.1Re-query CCDS DB by GeneID:339501See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1563.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366757.4 ENSP00000355719.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366757.4Link to Ensembl Protein Viewer:ENSP00000355719.3Re-query CCDS DB by Nucleotide ID:ENST00000366757Re-query CCDS DB by Protein ID:ENSP00000355719
Original member Current member NCBI NM_183062.3 NP_898885.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_183062.3Link to Protein Sequence:NP_898885.1Re-query CCDS DB by Nucleotide ID:NM_183062Re-query CCDS DB by Protein ID:NP_898885Link to BLAST:NP_898885.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_898885.1 326 A1L453 326 100% 0 0

Chromosomal Locations for CCDS 1563.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 227815717 227815864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 227816090 227816252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 227817209 227817480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 227845470 227845612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 227845954 227846208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGGCTGCCCCTGCTTCCGTCATGGGCCCACTCGGGCCCTCTGCCCTGGGCCTTCTGCTGCTGCTCCTGG
TGGTGGCCCCTCCCCGGGTCGCAGCATTGGTCCACAGACAGCCAGAGAACCAGGGAATCTCCCTAACTGG
CAGCGTGGCCTGTGGTCGGCCCAGCATGGAGGGGAAAATCCTGGGCGGCGTCCCTGCGCCCGAGAGGAAG
TGGCCGTGGCAGGTCAGCGTGCACTACGCAGGCCTCCACGTCTGCGGCGGCTCCATCCTCAATGAGTACT
GGGTGCTGTCAGCTGCGCACTGCTTTCACAGGGACAAGAATATCAAAATCTATGACATGTACGTAGGCCT
CGTAAACCTCAGGGTGGCCGGCAACCACACCCAGTGGTATGAGGTGAACAGGGTGATCCTGCACCCCACA
TATGAGATGTACCACCCCATCGGAGGTGACGTGGCCCTGGTGCAGCTGAAGACCCGCATTGTGTTTTCTG
AGTCCGTGCTCCCGGTTTGCCTTGCAACTCCAGAAGTGAACCTTACCAGTGCCAATTGCTGGGCTACGGG
ATGGGGACTAGTCTCAAAACAAGGTGAGACCTCAGACGAGCTGCAGGAGATGCAGCTCCCGCTGATCCTG
GAGCCCTGGTGCCACCTGCTCTACGGACACATGTCCTACATCATGCCCGACATGCTGTGTGCTGGGGACA
TCCTGAATGCTAAGACCGTGTGTGAGGGCGACTCCGGGGGCCCACTTGTCTGTGAATTCAACCGCAGCTG
GTTGCAGATTGGAATTGTGAGCTGGGGCCGAGGCTGCTCCAACCCTCTGTACCCTGGAGTGTATGCCAGT
GTTTCCTATTTCTCAAAATGGATATGTGATAACATAGAAATCACGCCCACTCCTGCTCAGCCAGCCCCTG
CTCTCTCTCCAGCTCTGGGGCCCACTCTCAGCGTCCTAATGGCCATGCTGGCTGGCTGGTCAGTGCTGTG
A

Translation (326 aa):
MAAPASVMGPLGPSALGLLLLLLVVAPPRVAALVHRQPENQGISLTGSVACGRPSMEGKILGGVPAPERK
WPWQVSVHYAGLHVCGGSILNEYWVLSAAHCFHRDKNIKIYDMYVGLVNLRVAGNHTQWYEVNRVILHPT
YEMYHPIGGDVALVQLKTRIVFSESVLPVCLATPEVNLTSANCWATGWGLVSKQGETSDELQEMQLPLIL
EPWCHLLYGHMSYIMPDMLCAGDILNAKTVCEGDSGGPLVCEFNRSWLQIGIVSWGRGCSNPLYPGVYAS
VSYFSKWICDNIEITPTPAQPAPALSPALGPTLSVLMAMLAGWSVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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