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Report for CCDS81986.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81986.1 Public Homo sapiens 16 DOK4 24 110 108 CCDS HistoryNCBI Gene:55715Re-query CCDS DB by CCDS ID:81986.1Re-query CCDS DB by GeneID:55715See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81986.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000566936.5 ENSP00000455566.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000566936.5Link to Ensembl Protein Viewer:ENSP00000455566.1Re-query CCDS DB by Nucleotide ID:ENST00000566936Re-query CCDS DB by Protein ID:ENSP00000455566
Original member Current member NCBI NM_001330556.2 NP_001317485.1 Accepted alive Link to Nucleotide Sequence:NM_001330556.2Link to Protein Sequence:NP_001317485.1Re-query CCDS DB by Nucleotide ID:NM_001330556Re-query CCDS DB by Protein ID:NP_001317485Link to BLAST:NP_001317485.1
Original member Current member NCBI NM_001369618.1 NP_001356547.1 Accepted alive Link to Nucleotide Sequence:NM_001369618.1Link to Protein Sequence:NP_001356547.1Re-query CCDS DB by Nucleotide ID:NM_001369618Re-query CCDS DB by Protein ID:NP_001356547Link to BLAST:NP_001356547.1
Original member Current member NCBI NM_001369620.1 NP_001356549.1 Accepted alive Link to Nucleotide Sequence:NM_001369620.1Link to Protein Sequence:NP_001356549.1Re-query CCDS DB by Nucleotide ID:NM_001369620Re-query CCDS DB by Protein ID:NP_001356549Link to BLAST:NP_001356549.1
Original member Current member NCBI NM_001394652.1 NP_001381581.1 Accepted alive Link to Nucleotide Sequence:NM_001394652.1Link to Protein Sequence:NP_001381581.1Re-query CCDS DB by Nucleotide ID:NM_001394652Re-query CCDS DB by Protein ID:NP_001381581Link to BLAST:NP_001381581.1
Original member Current member NCBI NM_001394653.1 NP_001381582.1 Accepted alive Link to Nucleotide Sequence:NM_001394653.1Link to Protein Sequence:NP_001381582.1Re-query CCDS DB by Nucleotide ID:NM_001394653Re-query CCDS DB by Protein ID:NP_001381582Link to BLAST:NP_001381582.1
Original member Current member NCBI NM_001394654.1 NP_001381583.1 Accepted alive Link to Nucleotide Sequence:NM_001394654.1Link to Protein Sequence:NP_001381583.1Re-query CCDS DB by Nucleotide ID:NM_001394654Re-query CCDS DB by Protein ID:NP_001381583Link to BLAST:NP_001381583.1
Original member Current member NCBI NM_001394655.1 NP_001381584.1 Accepted alive Link to Nucleotide Sequence:NM_001394655.1Link to Protein Sequence:NP_001381584.1Re-query CCDS DB by Nucleotide ID:NM_001394655Re-query CCDS DB by Protein ID:NP_001381584Link to BLAST:NP_001381584.1
Original member Current member NCBI NM_001394656.1 NP_001381585.1 Accepted alive Link to Nucleotide Sequence:NM_001394656.1Link to Protein Sequence:NP_001381585.1Re-query CCDS DB by Nucleotide ID:NM_001394656Re-query CCDS DB by Protein ID:NP_001381585Link to BLAST:NP_001381585.1

Chromosomal Locations for CCDS 81986.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 57473377 57473736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57473901 57474039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57474793 57474982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57475100 57475219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57475506 57475620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57475850 57475957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57479442 57479507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1098 nt):
ATGGCGACCAATTTCAGTGACATCGTCAAGCAAGGCTACGTGAAGATGAAGAGCAGGAAGCTCGGGATCT
ACCGGAGGTGCTGGCTGGTGTTCCGGAAATCCTCCAGCAAGGGGCCCCAGCGGCTGGAGAAGTATCCAGA
TGAGAAGTCGGTGTGCCTCCGGGGCTGCCCCAAGGTGACTGAGATCAGCAACGTCAAGTGTGTTACGCGG
CTCCCCAAGGAGACCAAGCGGCAGGCGGTGGCCATCATATTCACTGATGACTCGGCACGTACCTTCACCT
GCGACTCAGAGCTAGAGGCAGAGGAGTGGTACAAGACACTATCTGTGGAGTGTCTGGGGTCCCGCCTCAA
CGACATCAGTCTGGGAGAACCTGACCTCCTGGCCCCAGGGGTGCAGTGTGAACAGACAGATCGCTTCAAT
GTCTTCCTGCTGCCCTGCCCCAACCTGGACGTGTATGGCGAGTGCAAGCTGCAGATCACCCACGAGAACA
TCTACCTCTGGGACATCCACAACCCCCGTGTGAAGCTCGTCTCGTGGCCCCTCTGCTCACTGCGCCGCTA
TGGCCGGGATGCCACACGCTTTACCTTCGAGGCTGGCCGGATGTGTGATGCTGGGGAAGGACTCTATACC
TTCCAGACACAAGAGGGGGAGCAGATTTACCAGCGCGTCCACAGTGCCACCCTGGCCATCGCAGAGCAGC
ACAAGCGGGTCCTGCTGGAAATGGAGAAGAACGTGAGGCTGCTGAACAAGGGCACGGAACATTACTCGTA
TCCCTGCACACCCACGACCATGCTGCCGCGCAGTGCCTACTGGCACCACATCACTGGTTCCCAGAACATC
GCCGAAGCCTCCAGCTATGCTGGTGAGTCGCTTCCATGCCCCACACCCACCTGCCAGGAGGCTTTGTGGA
GGATGAGGCCTATTGGGCAGGGGTCTTTTGACCTAGCTCTGAGTTCTGAGCCTGCTTCTGTGCCCACAGG
TGAGGGGTATGGGGCAGCCCAGGCCAGCTCGGAAACAGACCTCCTCAACAGATTCATCCTGCTAAAGCCA
AAGCCCAGCCAGGGGGACAGCAGTGAGGCCAAGACCCCATCCCAGTGA

Translation (365 aa):
MATNFSDIVKQGYVKMKSRKLGIYRRCWLVFRKSSSKGPQRLEKYPDEKSVCLRGCPKVTEISNVKCVTR
LPKETKRQAVAIIFTDDSARTFTCDSELEAEEWYKTLSVECLGSRLNDISLGEPDLLAPGVQCEQTDRFN
VFLLPCPNLDVYGECKLQITHENIYLWDIHNPRVKLVSWPLCSLRRYGRDATRFTFEAGRMCDAGEGLYT
FQTQEGEQIYQRVHSATLAIAEQHKRVLLEMEKNVRLLNKGTEHYSYPCTPTTMLPRSAYWHHITGSQNI
AEASSYAGESLPCPTPTCQEALWRMRPIGQGSFDLALSSEPASVPTGEGYGAAQASSETDLLNRFILLKP
KPSQGDSSEAKTPSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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