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Report for CCDS22032.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22032.1 Public Mus musculus 7 Mrpl23 23 108 98 CCDS HistoryNCBI Gene:19935Re-query CCDS DB by CCDS ID:22032.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22032.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038675.6 ENSMUSP00000039784.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038675.6Link to Ensembl Protein Viewer:ENSMUSP00000039784.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000038675Re-query CCDS DB by Protein ID:ENSMUSP00000039784
Original member NCBI NM_011288.2 NP_035418.1 Updated not alive Link to Nucleotide Sequence:NM_011288.2Link to Protein Sequence:NP_035418.1Re-query CCDS DB by Nucleotide ID:NM_011288Re-query CCDS DB by Protein ID:NP_035418
Current member NCBI NM_011288.3 NP_035418.1 Accepted alive Link to Nucleotide Sequence:NM_011288.3Link to Protein Sequence:NP_035418.1Re-query CCDS DB by Nucleotide ID:NM_011288Re-query CCDS DB by Protein ID:NP_035418Link to BLAST:NP_035418.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035418.1 146 O35972 146 100% 0 0

Chromosomal Locations for CCDS 22032.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 142533178 142533194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142535005 142535127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142536070 142536152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142537267 142537340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142540519 142540662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (441 nt):
ATGGCGCGGAATGTGTTGTACCCCCTTTACCAACTGGGTGGCCCCCAGCTCCGTGTATTTCGAACTAACT
TCTTCATTCAGCTGGTGCGGCCTGGTACTGCACAGCCTGAAGATACCGTGCAGTTCCGGATCCCCATGGA
GATGACCAGGGTGGACCTTCGGAATTACCTTGAGCAGATTTACAATGTTCCCGTGGCTGCCGTGCGCACA
CGGGTGCAGCATGGCTCCAACAGGAGGAGGGATCACAAGAATGTGAGGATCAAGAAACCAGACTACAAAG
TGGCCTACGTGCAGCTGGCCCATGGGCAGACCTTCACTTTCCCAGATCTTTTTCCAGAGAAGGACCCCCG
TTCTCCAGAACCTCTGGAAGAGGAGCTACCCCAGCAGAGGCAAAGCAGCGACCTGAGGTGCCCTGGTATC
CCTTCCTGGTTTGGCCTATGA

Translation (146 aa):
MARNVLYPLYQLGGPQLRVFRTNFFIQLVRPGTAQPEDTVQFRIPMEMTRVDLRNYLEQIYNVPVAAVRT
RVQHGSNRRRDHKNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDPRSPEPLEEELPQQRQSSDLRCPGI
PSWFGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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