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Report for CCDS9248.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9248.1 Public Homo sapiens 12 RILPL2 24 110 108 CCDS HistoryNCBI Gene:196383Re-query CCDS DB by CCDS ID:9248.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9248.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000280571.10 ENSP00000280571.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000280571.10Link to Ensembl Protein Viewer:ENSP00000280571.8Re-query CCDS DB by Nucleotide ID:ENST00000280571Re-query CCDS DB by Protein ID:ENSP00000280571
Original member Current member NCBI NM_145058.3 NP_659495.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145058.3Link to Protein Sequence:NP_659495.1Re-query CCDS DB by Nucleotide ID:NM_145058Re-query CCDS DB by Protein ID:NP_659495Link to BLAST:NP_659495.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659495.1 211 Q969X0 211 100% 0 0

Chromosomal Locations for CCDS 9248.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 123415891 123415921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123423044 123423157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123430508 123430659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 123436082 123436420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (636 nt):
ATGGAGGAGCCCCCTGTGCGAGAAGAGGAAGAGGAGGAGGGAGAGGAGGACGAGGAGAGGGACGAGGTTG
GGCCCGAGGGGGCGCTGGGCAAGAGCCCCTTCCAGCTGACCGCCGAGGACGTGTATGACATCTCCTACCT
GTTGGGCCGCGAGCTTATGGCCCTGGGCAGCGACCCCCGGGTGACGCAGCTGCAGTTCAAAGTCGTCCGC
GTCCTGGAGATGCTGGAGGCGCTGGTGAATGAGGGCAGCCTGGCGCTGGAGGAGCTGAAGATGGAGAGGG
ACCACCTCAGGAAGGAGGTGGAGGGGCTGCGGAGACAGAGCCCTCCGGCCAGCGGGGAGGTGAACCTGGG
CCCAAACAAAATGGTGGTTGACCTGACAGATCCCAACCGACCCCGCTTCACTCTGCAGGAGCTAAGGGAT
GTGCTGCAGGAACGCAACAAACTCAAGTCGCAGCTCCTGGTGGTGCAGGAAGAGCTGCAGTGCTACAAGA
GTGGCCTGATTCCACCAAGAGAAGGCCCAGGAGGAAGAAGAGAAAAAGATGCTGTGGTTACTAGTGCCAA
AAATGCTGGCAGGAACAAGGAGGAGAAGACAATCATAAAAAAGCTGTTCTTTTTTCGATCGGGGAAACAG
ACCTAG

Translation (211 aa):
MEEPPVREEEEEEGEEDEERDEVGPEGALGKSPFQLTAEDVYDISYLLGRELMALGSDPRVTQLQFKVVR
VLEMLEALVNEGSLALEELKMERDHLRKEVEGLRRQSPPASGEVNLGPNKMVVDLTDPNRPRFTLQELRD
VLQERNKLKSQLLVVQEELQCYKSGLIPPREGPGGRREKDAVVTSAKNAGRNKEEKTIIKKLFFFRSGKQ
T


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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