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Report for CCDS44911.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44911.1 Public Homo sapiens 12 ZNF385A 24 110 108 CCDS HistoryNCBI Gene:25946Re-query CCDS DB by CCDS ID:44911.1Re-query CCDS DB by GeneID:25946See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44911.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338010.9 ENSP00000338927.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000338010.9Link to Ensembl Protein Viewer:ENSP00000338927.5Re-query CCDS DB by Nucleotide ID:ENST00000338010Re-query CCDS DB by Protein ID:ENSP00000338927
Original member Current member NCBI NM_001130967.3 NP_001124439.1 Accepted alive Link to Nucleotide Sequence:NM_001130967.3Link to Protein Sequence:NP_001124439.1Re-query CCDS DB by Nucleotide ID:NM_001130967Re-query CCDS DB by Protein ID:NP_001124439Link to BLAST:NP_001124439.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001124439.1 386 Q96PM9-4 386 100% 0 0

Chromosomal Locations for CCDS 44911.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 54370256 54370486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54370626 54370721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54370927 54371096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54371473 54371715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54373973 54374135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54375844 54375954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54384428 54384564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54391235 54391244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1161 nt):
ATGATCCTCGGCAGCCTGAGCCGGGCAGGGCCCCTGCCTCTGCTACGGCAGCCCCCGATCATGCAGCCCC
CACTGGACCTCAAGCAGATCCTGCCCTTCCCACTCGAGCCAGCCCCTACCCTTGGCCTCTTCAGCAACTA
CAGCACCATGGACCCTGTGCAGAAGGCTGTGCTCTCCCACACTTTTGGGGGACCCTTGCTCAAGACCAAG
CGGCCCGTCATTTCCTGTAATATCTGTCAAATCCGCTTCAATTCTCAGAGCCAGGCTGAGGCGCACTACA
AAGGTAATCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTGCCAAGACCAGAGGCAGGGAGCCTGGCGT
CCGAGAACCTGGAGACCCAGCTCCCCCAGGCAGCACCCCAACAAATGGGGATGGTGTAGCACCCCGTCCA
GTTTCCATGGAGAATGGACTGGGGCCAGCCCCAGGATCCCCAGAGAAACAGCCTGGCTCCCCATCCCCTC
CCAGCATTCCGGAGACTGGTCAGGGTGTAACCAAGGGTGAAGGGGGGACTCCAGCCCCGGCTTCCTTGCC
TGGGGGTAGCAAGGAAGAGGAGGAGAAAGCCAAGCGGCTGCTCTACTGTGCTCTGTGCAAGGTGGCTGTG
AACTCCCTGTCCCAGCTTGAGGCACATAACAAAGGTACTAAGCACAAGACAATTCTGGAGGCCCGAAGTG
GGCTCGGGCCCATCAAAGCTTACCCTCGGCTGGGGCCTCCCACCCCGGGGGAACCAGAGGCTCCTGCCCA
GGACCGAACTTTCCACTGTGAGATCTGCAATGTCAAGGTCAACTCGGAGGTCCAACTGAAACAGCACATC
TCCAGCCGGCGGCACCGAGACGGCGTGGCCGGGAAGCCCAACCCACTACTGAGCCGTCACAAGAAGTCTA
GGGGCGCCGGGGAGCTGGCGGGCACGCTGACTTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCGGCCT
GCTCCCCAGCCCCCTGGCGGTGGCTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCCCTGCGCCCG
GCTCCAGCCGCACCTCTTCTCCAGGGACCGCCGATCACTCACCCTCTGCTTCACCCGGCCCCCGGACCCA
TCCGAACTGCGCACGGACCCATCCTCTTCTCCCCGTACTGA

Translation (386 aa):
MILGSLSRAGPLPLLRQPPIMQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHTFGGPLLKTK
RPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDGVAPRP
VSMENGLGPAPGSPEKQPGSPSPPSIPETGQGVTKGEGGTPAPASLPGGSKEEEEKAKRLLYCALCKVAV
NSLSQLEAHNKGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHI
SSRRHRDGVAGKPNPLLSRHKKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRP
APAAPLLQGPPITHPLLHPAPGPIRTAHGPILFSPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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