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Report for CCDS22585.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22585.1 Public Mus musculus 8 Ces2a 23 108 98 CCDS HistoryNCBI Gene:102022Re-query CCDS DB by CCDS ID:22585.1Re-query CCDS DB by GeneID:102022See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22585.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034346.14 ENSMUSP00000034346.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034346.14Link to Ensembl Protein Viewer:ENSMUSP00000034346.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000034346Re-query CCDS DB by Protein ID:ENSMUSP00000034346
Original member Current member NCBI NM_133960.5 NP_598721.1 Accepted alive Link to Nucleotide Sequence:NM_133960.5Link to Protein Sequence:NP_598721.1Re-query CCDS DB by Nucleotide ID:NM_133960Re-query CCDS DB by Protein ID:NP_598721Link to BLAST:NP_598721.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598721.1 558 Q8QZR3-1 558 100% 0 0

Chromosomal Locations for CCDS 22585.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 104734072 104734147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104734697 104734901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104736062 104736200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104737078 104737211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104737292 104737550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104738654 104738752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104739030 104739170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104739290 104739370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104739607 104739751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104740140 104740277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104740762 104740834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104741230 104741416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1677 nt):
ATGCCATTGGCTAGACTTCCTGGTTGGCTGTGTGTTGTTGCCTGTGGGCTCCTGCTTCTCCTCCAGCATG
TGCATGGCCAGGACTCAGCCAGCCCCATCAGGAACACCCACAGGGGTCAGGTGAGAGGCAGCTTTGTCCA
CGTGAAGGACACTAAATCTGGTGTCCATGCCTTCCTGGGAATCCCCTTTGCCAAGCCTCCTGTAGGACTA
CTGCGCTTTGCACCTCCTGAGGACCCTGAGCCATGGAGTGGTGTGAGAGATGGGACCTCACAGCCGGCCA
TGTGTCTGCAGCCTGATATAATGAATTTAGAGGATGCGAAGGAAATGAATCTGATCCTGCCTCCCATCTC
TATGTCCGAGGACTGCCTGTATCTCAACATCTACACACCAACCCACGCCCAGGAGGGCTCTAACCTGCCT
GTGATGGTATGGATCCACGGTGGTGGACTGGTTGTAGGATCAGCTTCCATGAATGATGTATCTAAACTGG
CAGCCACTGAGGAAATAGTAATTGTCGCCATCCAGTATCGCTTGGGGGTCCTTGGCTTCTTCAGCACTGG
AGACCAGCATGCCAGAGGCAACTGGGGATACCTGGACCAAGTGGCTGCCTTACGCTGGGTGCAGAAGAAT
ATTGCTTACTTTGGAGGCAACCGTGACAGGGTCACTATATTTGGAGTCTCAGCAGGAGGTACAAGTGTGT
CTTCTCATATTCTGTCCCCAATGTCCAAAGGACTCTTTCATGGAGCCATTATGCAGAGTGGAGTGGCCCT
GCTGCCTGACCTCATCTCTGACACTTCTGAGGTGGTCTACAAGACAGTAGCCAACCTATCTGGTTGTGAA
GCCACAGACTCAGAAGCCCTGATCCACTGCCTGAGAGCAAAGAGTAAACAAGAGATCCTGGCTATTAACC
AGGTCTTCAAGATGATCCCTGCTGTGGTGGATGGGGAGTTCCTACCCAAGCATCCTCAGGAGCTGCTGAC
CTCTATGGATTTTCACCCTGTCCCCAGCATCATTGGTGTCAACACAGATGAATGTGGCTGGGGAGTCCCC
ATGTTCATGGGCCTTGACCATATCATAAAGAACATAACCAGAGAGACCCTGCCAGCTGTTCTGAAGAACA
CAGCAGCACGGATGATGTTGCCTCCAGAATGTAGTCACCTGCTAGTGGAGGAGTATATGGGGGACACTGA
GGACCCAGAGACCCTGCAAGCACAGTTCAGAGAGATGCTGGGGGACTTCATGTTTGTGATCCCTGCTCTC
CAAGTGGCACATTTCCAGCGTTCCCAGGCTCCTGTCTACTTCTATGAGTTCCAGCATCTGTCCAGCTTCA
TCAAGCATGTCAGGCCATCACATGTGAAGGCAGACCATGGTGATGACGTTGCCTTTGTCTTTGGCTCCTA
TTTGTGGGACATGAATTTGGACCTCACTGAGGAGGAGGAGCTGCTAAAGAGGATGATGATGAAGTACTGG
GCCAATTTCGCAAGAAATGGGAACCCCAACAGTGAGGGTCTACCCTCCTGGCCTGTGTTGGACCATGATG
AGCAGTACCTGCAGCTGGACACCCAGCCTGCTGTGGGTCGAGCCCTGAAGGCCAGAAGGCTGCAGTTCTG
GACCAAGACTCTGCCCCAGAAGATCCAGGAGCTCAAGGGTTCTCAGGACAAGCATGCAGAGCTGTAG

Translation (558 aa):
MPLARLPGWLCVVACGLLLLLQHVHGQDSASPIRNTHRGQVRGSFVHVKDTKSGVHAFLGIPFAKPPVGL
LRFAPPEDPEPWSGVRDGTSQPAMCLQPDIMNLEDAKEMNLILPPISMSEDCLYLNIYTPTHAQEGSNLP
VMVWIHGGGLVVGSASMNDVSKLAATEEIVIVAIQYRLGVLGFFSTGDQHARGNWGYLDQVAALRWVQKN
IAYFGGNRDRVTIFGVSAGGTSVSSHILSPMSKGLFHGAIMQSGVALLPDLISDTSEVVYKTVANLSGCE
ATDSEALIHCLRAKSKQEILAINQVFKMIPAVVDGEFLPKHPQELLTSMDFHPVPSIIGVNTDECGWGVP
MFMGLDHIIKNITRETLPAVLKNTAARMMLPPECSHLLVEEYMGDTEDPETLQAQFREMLGDFMFVIPAL
QVAHFQRSQAPVYFYEFQHLSSFIKHVRPSHVKADHGDDVAFVFGSYLWDMNLDLTEEEELLKRMMMKYW
ANFARNGNPNSEGLPSWPVLDHDEQYLQLDTQPAVGRALKARRLQFWTKTLPQKIQELKGSQDKHAEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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