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Report for CCDS82060.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82060.1 Public Homo sapiens 17 NAA38 24 110 108 CCDS HistoryNCBI Gene:84316Re-query CCDS DB by CCDS ID:82060.1Re-query CCDS DB by GeneID:84316See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82060.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000575771.6 ENSP00000460172.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000575771.6Link to Ensembl Protein Viewer:ENSP00000460172.2Re-query CCDS DB by Nucleotide ID:ENST00000575771Re-query CCDS DB by Protein ID:ENSP00000460172
Original member Current member NCBI NM_001320925.4 NP_001307854.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001320925.4Link to Protein Sequence:NP_001307854.1Re-query CCDS DB by Nucleotide ID:NM_001320925Re-query CCDS DB by Protein ID:NP_001307854Link to BLAST:NP_001307854.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307854.1 125 Q9BRA0-1 125 100% 0 0

Chromosomal Locations for CCDS 82060.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 7856731 7856843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7857015 7857198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7857383 7857463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (378 nt):
ATGGCCGGAGCTGGACCGACCATGCTGCTACGAGAAGAGAATGGCTGTTGCAGTCGGCGTCAGAGCAGCT
CCAGTGCTGGGGATTCGGACGGAGAGCGCGAGGACTCGGCGGCTGAGCGCGCCCGACAGCAGCTAGAGGC
GCTGCTCAACAAGACTATGCGCATTCGCATGACAGATGGACGGACACTGGTCGGCTGCTTCCTCTGCACT
GACCGTGACTGCAATGTCATCCTGGGCTCGGCGCAGGAGTTCCTCAAGCCGTCGGATTCCTTCTCTGCCG
GGGAGCCCCGTGTGCTGGGCCTGGCCATGGTACCCGGACACCACATCGTTTCCATTGAGGTGCAGAGGGA
GAGTCTGACCGGGCCTCCGTATCTCTGA

Translation (125 aa):
MAGAGPTMLLREENGCCSRRQSSSSAGDSDGEREDSAAERARQQLEALLNKTMRIRMTDGRTLVGCFLCT
DRDCNVILGSAQEFLKPSDSFSAGEPRVLGLAMVPGHHIVSIEVQRESLTGPPYL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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