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Report for CCDS73626.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73626.1 Public Homo sapiens 14 SDR39U1 24 110 108 CCDS HistoryNCBI Gene:56948Re-query CCDS DB by CCDS ID:73626.1Re-query CCDS DB by GeneID:56948See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73626.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000554698.5 ENSP00000452438.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000554698.5Link to Ensembl Protein Viewer:ENSP00000452438.1Re-query CCDS DB by Nucleotide ID:ENST00000554698Re-query CCDS DB by Protein ID:ENSP00000452438
Original member Current member NCBI NM_001290293.3 NP_001277222.1 Accepted alive Link to Nucleotide Sequence:NM_001290293.3Link to Protein Sequence:NP_001277222.1Re-query CCDS DB by Nucleotide ID:NM_001290293Re-query CCDS DB by Protein ID:NP_001277222Link to BLAST:NP_001277222.1
Original member Current member NCBI NM_001387327.1 NP_001374256.1 Accepted alive Link to Nucleotide Sequence:NM_001387327.1Link to Protein Sequence:NP_001374256.1Re-query CCDS DB by Nucleotide ID:NM_001387327Re-query CCDS DB by Protein ID:NP_001374256Link to BLAST:NP_001374256.1

Chromosomal Locations for CCDS 73626.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24440083 24440492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24440783 24440926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24442098 24442101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (558 nt):
ATGGCTTACTACCAGCCCAGTCTGACTGCGGAGTATGATGAAGACAGCCCAGGAGGGGACTTTGACTTTT
TCTCCAACCTCGTAACCAAATGGGAAGCTGCAGCCAGGCTTCCTGGAGATTCTACACGCCAGGTGGTGGT
GCGCTCAGGGGTTGTGCTGGGCCGTGGGGGTGGTGCCATGGGCCACATGCTGCTGCCCTTTCGCCTGGGC
CTGGGGGGCCCCATCGGCTCAGGCCACCAATTCTTCCCCTGGATACACATCGGGGACCTGGCAGGAATCC
TGACCCATGCCCTTGAAGCAAACCACGTGCACGGGGTCCTGAATGGAGTGGCTCCATCCTCCGCCACTAA
TGCTGAGTTTGCCCAGACCTTGGGTGCTGCCCTGGGCCGCCGAGCCTTCATCCCTCTCCCCAGCGCTGTG
GTGCAAGCTGTCTTTGGGCGACAGCGTGCCATCATGCTGCTGGAGGGCCAGAAGGTGATCCCACAGCGAA
CACTGGCCACTGGCTACCAGTATTCCTTCCCAGAGCTAGGGGCTGCCTTAAAGGAAATTGTAGCCTAA

Translation (185 aa):
MAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLG
LGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATNAEFAQTLGAALGRRAFIPLPSAV
VQAVFGRQRAIMLLEGQKVIPQRTLATGYQYSFPELGAALKEIVA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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