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Report for CCDS91798.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91798.1 Public Homo sapiens 13 N4BP2L2 24 110 108 CCDS HistoryNCBI Gene:10443Re-query CCDS DB by CCDS ID:91798.1Re-query CCDS DB by GeneID:10443See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91798.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000674428.1 ENSP00000501533.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674428.1Link to Ensembl Protein Viewer:ENSP00000501533.1Re-query CCDS DB by Nucleotide ID:ENST00000674428Re-query CCDS DB by Protein ID:ENSP00000501533
Original member Current member NCBI NM_001387081.1 NP_001374010.1 Accepted alive Link to Nucleotide Sequence:NM_001387081.1Link to Protein Sequence:NP_001374010.1Re-query CCDS DB by Nucleotide ID:NM_001387081Re-query CCDS DB by Protein ID:NP_001374010Link to BLAST:NP_001374010.1
Original member Current member NCBI NM_001387224.1 NP_001374153.1 Accepted alive Link to Nucleotide Sequence:NM_001387224.1Link to Protein Sequence:NP_001374153.1Re-query CCDS DB by Nucleotide ID:NM_001387224Re-query CCDS DB by Protein ID:NP_001374153Link to BLAST:NP_001374153.1

Chromosomal Locations for CCDS 91798.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 32517802 32518003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32521373 32521449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32522182 32522270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32527408 32527532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 32536933 32537027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (588 nt):
ATGTCTTATGGTGAAATTGAAGGTAAATTCTTGGGACCTAGAGAAGAAGTAACGAGTGAGCCACGCTGTA
AAAAATTGAAGTCAACCACAGAGTCAATTCTGCTTGGTCAGAATCGTGATGGCATTGTGTTCAGCACTGA
TGACTATTTTCACCATCAAGATGGGTACAGGTATAATGTTAATCAACTTGGTGATGCCCATGACTGGAAC
CAGAACAGAGCAAAACAAGCTATCGATCAGGGAAGATCTCCAGTTATAATAGATAACACTAATATACAAG
CTTGGGAAATGAAGCCATATGTGGAAGTGGCCATAGGAAAAGGATACAGAGTAGAGTTTCATGAACCTGA
AACTTGGTGGAAATTTGATCCTGAAGAATTAGAAAAGAGGAATAAACATGGTGTGTCTCGAAAGAAGATT
GCTCAGATGTTGGATCGTTATGAATATCAAATGTCCATTTCTATTGTAATGAATTCAGTGGAACCATCAC
ACAAAAGCACACAAAGACCTCCTCCTCCACAGGGGAGACAGAGGTGGGGAGGCTCTCTTGGCTCACATAA
TCGTGTCTGTGTCACAAATAATCATTAA

Translation (195 aa):
MSYGEIEGKFLGPREEVTSEPRCKKLKSTTESILLGQNRDGIVFSTDDYFHHQDGYRYNVNQLGDAHDWN
QNRAKQAIDQGRSPVIIDNTNIQAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEELEKRNKHGVSRKKI
AQMLDRYEYQMSISIVMNSVEPSHKSTQRPPPPQGRQRWGGSLGSHNRVCVTNNH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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