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Report for CCDS8527.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8527.1 Public Homo sapiens 12 FGF6 24 110 108 CCDS HistoryNCBI Gene:2251Re-query CCDS DB by CCDS ID:8527.1Re-query CCDS DB by GeneID:2251See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8527.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000228837.3 ENSP00000228837.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000228837.3Link to Ensembl Protein Viewer:ENSP00000228837.2Re-query CCDS DB by Nucleotide ID:ENST00000228837Re-query CCDS DB by Protein ID:ENSP00000228837
Original member Current member NCBI NM_020996.3 NP_066276.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020996.3Link to Protein Sequence:NP_066276.2Re-query CCDS DB by Nucleotide ID:NM_020996Re-query CCDS DB by Protein ID:NP_066276Link to BLAST:NP_066276.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066276.2 208 P10767 208 100% 0 0

Chromosomal Locations for CCDS 8527.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 4434215 4434391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 4444133 4444236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 4445225 4445570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (627 nt):
ATGGCCCTGGGACAGAAACTGTTCATCACTATGTCCCGGGGAGCAGGACGTCTGCAGGGCACGCTGTGGG
CTCTCGTCTTCCTAGGCATCCTAGTGGGCATGGTGGTGCCCTCGCCTGCAGGCACCCGTGCCAACAACAC
GCTGCTGGACTCGAGGGGCTGGGGCACCCTGCTGTCCAGGTCTCGCGCCGGGCTAGCTGGAGAGATTGCC
GGGGTGAACTGGGAAAGTGGCTATTTGGTGGGGATCAAGCGGCAGCGGAGGCTCTACTGCAACGTGGGCA
TCGGCTTTCACCTCCAGGTGCTCCCCGACGGCCGGATCAGCGGGACCCACGAGGAGAACCCCTACAGCCT
GCTGGAAATTTCCACTGTGGAGCGAGGCGTGGTGAGTCTCTTTGGAGTGAGAAGTGCCCTCTTCGTTGCC
ATGAACAGTAAAGGAAGATTGTACGCAACGCCCAGCTTCCAAGAAGAATGCAAGTTCAGAGAAACCCTCC
TGCCCAACAATTACAATGCCTACGAGTCAGACTTGTACCAAGGGACCTACATTGCCCTGAGCAAATACGG
ACGGGTAAAGCGGGGCAGCAAGGTGTCCCCGATCATGACTGTCACTCATTTCCTTCCCAGGATCTAA

Translation (208 aa):
MALGQKLFITMSRGAGRLQGTLWALVFLGILVGMVVPSPAGTRANNTLLDSRGWGTLLSRSRAGLAGEIA
GVNWESGYLVGIKRQRRLYCNVGIGFHLQVLPDGRISGTHEENPYSLLEISTVERGVVSLFGVRSALFVA
MNSKGRLYATPSFQEECKFRETLLPNNYNAYESDLYQGTYIALSKYGRVKRGSKVSPIMTVTHFLPRI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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