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Report for CCDS92649.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92649.1 Public Homo sapiens 19 PNMA8C 24 110 108 CCDS HistoryNCBI Gene:110806277Re-query CCDS DB by CCDS ID:92649.1Re-query CCDS DB by GeneID:110806277See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92649.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000617053.3 ENSP00000490139.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000617053.3Link to Ensembl Protein Viewer:ENSP00000490139.1Re-query CCDS DB by Nucleotide ID:ENST00000617053Re-query CCDS DB by Protein ID:ENSP00000490139
Original member Current member NCBI NM_001386793.1 NP_001373722.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001386793.1Link to Protein Sequence:NP_001373722.1Re-query CCDS DB by Nucleotide ID:NM_001386793Re-query CCDS DB by Protein ID:NP_001373722Link to BLAST:NP_001373722.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001373722.1 204 A0A1B0GUJ8 204 100% 0 0

Chromosomal Locations for CCDS 92649.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 46427745 46428359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (615 nt):
ATGCTGTTCGGGGTGAAGGACATTGCACTGTTGGAGCACGGGTGCAAGGCCCTGGAGGTGGACAGTTACA
AG
TCCCTGATGATCCTGGGGATCCCGGAGGACTGCAACCACGAGGAATTCGAAGAGATTATTCGGCTGCC
C
CTCAAACCTCTAGGCAAGTTCGAAGTGGCTGGGAAGGCCTATCTGGAAGAAGATAAATCCAAGGCGGCC
ATC
ATTCAGCTGACGGAGGACATCAATTACGCCGTGGTCCCCAGGGAGATCAAGGGCAAGGGCGGTGTGT
GG
AGAGTGGTCTACATGCCCCGGAAGCAGGACATTGAATTCCTGACCAAGCTGAACCTCTTTCTGCAGAG
C
GAGGGCAGGACGGTGGAGGATATGGCCCGGGTCCTGAGGCAGGAACTGTGTCCCCCAGCCACGGGCCCC
AGA
GAGCTGCCTGCAAGAAAGTGCTCTGTGCCTGGGCTGGGGGAGAAACCGGAGGCTGGGGCCACCGTCC
AG
ATGGACGTGGTGCCACCTCTGGACTCCTCCGAGAAGGAGAGCAAGGCTGGAGTTGGCAAGAGGGGCAA
A
AGGAAGAACAAGAAAAACCGCCGGCGGCATCACGCCTCAGACAAGAAGCTGTGA


Translation (204 aa):
MLFGVKDIALLEHGCKALEVDSYKSLMILGIPEDCNHEEFEEIIRLPLKPLGKFEVAGKAYLEEDKSKAA
I
IQLTEDINYAVVPREIKGKGGVWRVVYMPRKQDIEFLTKLNLFLQSEGRTVEDMARVLRQELCPPATGP
R
ELPARKCSVPGLGEKPEAGATVQMDVVPPLDSSEKESKAGVGKRGKRKNKKNRRRHHASDKKL




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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