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Report for CCDS12631.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12631.1 Public Homo sapiens 19 LYPD5 24 110 108 CCDS HistoryNCBI Gene:284348Re-query CCDS DB by CCDS ID:12631.1Re-query CCDS DB by GeneID:284348See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12631.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000414615.6 ENSP00000408433.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000414615.6Link to Ensembl Protein Viewer:ENSP00000408433.1Re-query CCDS DB by Nucleotide ID:ENST00000414615Re-query CCDS DB by Protein ID:ENSP00000408433
Original member Current member EBI ENST00000594013.5 ENSP00000471692.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000594013.5Link to Ensembl Protein Viewer:ENSP00000471692.1Re-query CCDS DB by Nucleotide ID:ENST00000594013Re-query CCDS DB by Protein ID:ENSP00000471692
Original member Current member EBI ENST00000651184.1 ENSP00000498724.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000651184.1Link to Ensembl Protein Viewer:ENSP00000498724.1Re-query CCDS DB by Nucleotide ID:ENST00000651184Re-query CCDS DB by Protein ID:ENSP00000498724
Original member Current member NCBI NM_001288763.2 NP_001275692.1 Accepted alive Link to Nucleotide Sequence:NM_001288763.2Link to Protein Sequence:NP_001275692.1Re-query CCDS DB by Nucleotide ID:NM_001288763Re-query CCDS DB by Protein ID:NP_001275692Link to BLAST:NP_001275692.1
Original member Current member NCBI NM_182573.3 NP_872379.2 Accepted alive Link to Nucleotide Sequence:NM_182573.3Link to Protein Sequence:NP_872379.2Re-query CCDS DB by Nucleotide ID:NM_182573Re-query CCDS DB by Protein ID:NP_872379Link to BLAST:NP_872379.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001275692.1 208 Q6UWN5-2 208 100% 0 0
NP_872379.2 208 Q6UWN5-2 208 100% 0 0

Chromosomal Locations for CCDS 12631.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 43797591 43797829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43798455 43798601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43798812 43798988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43799706 43799769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (627 nt):
ATGAAGCTGCCCAGCATCTCCTGTCCTCATGAGTGCTTTGAGGCTATCCTGTCTCTGGACACCGGGTATC
GCGCGCCGGTGACCCTGGTGCGGAAGGGCTGCTGGACCGGGCCTCCTGCGGGCCAGACGCAATCGAACGC
GGACGCGCTGCCGCCAGACTACTCGGTGGTGCGCGGCTGCACAACTGACAAATGCAACGCCCACCTCATG
ACTCATGACGCCCTCCCCAACCTGAGCCAAGCACCCGACCCGCCGACGCTCAGCGGCGCCGAGTGCTACG
CCTGTATCGGGGTCCACCAGGATGACTGCGCTATCGGCAGGTCCCGACGAGTCCAGTGTCACCAGGACCA
GACCGCCTGCTTCCAGGGCAATGGCAGAATGACAGTTGGCAATTTCTCAGTCCCTGTGTACATCAGAACC
TGCCACCGGCCCTCCTGCACCACCGAGGGCACCACCAGCCCCTGGACAGCCATCGACCTCCAGGGCTCCT
GCTGTGAGGGGTACCTCTGCAACAGGAAATCCATGACCCAGCCCTTCACCAGTGCTTCAGCCACCACCCC
TCCCCGAGCACTACAGGTCCTGGCCCTGCTCCTCCCAGTCCTCCTGCTGGTGGGGCTCTCAGCATAG

Translation (208 aa):
MKLPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPPDYSVVRGCTTDKCNAHLM
THDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIRT
CHRPSCTTEGTTSPWTAIDLQGSCCEGYLCNRKSMTQPFTSASATTPPRALQVLALLLPVLLLVGLSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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