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Report for CCDS46464.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46464.1 Public Homo sapiens 2 ZNF385B 24 110 108 CCDS HistoryNCBI Gene:151126Re-query CCDS DB by CCDS ID:46464.1Re-query CCDS DB by GeneID:151126See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46464.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336917.9 ENSP00000338225.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000336917.9Link to Ensembl Protein Viewer:ENSP00000338225.5Re-query CCDS DB by Nucleotide ID:ENST00000336917Re-query CCDS DB by Protein ID:ENSP00000338225
Original member Current member EBI ENST00000409692.5 ENSP00000386507.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409692.5Link to Ensembl Protein Viewer:ENSP00000386507.1Re-query CCDS DB by Nucleotide ID:ENST00000409692Re-query CCDS DB by Protein ID:ENSP00000386507
Original member Current member NCBI NM_001113398.3 NP_001106869.1 Accepted alive Link to Nucleotide Sequence:NM_001113398.3Link to Protein Sequence:NP_001106869.1Re-query CCDS DB by Nucleotide ID:NM_001113398Re-query CCDS DB by Protein ID:NP_001106869Link to BLAST:NP_001106869.1
Original member Current member NCBI NM_001282725.3 NP_001269654.1 Accepted alive Link to Nucleotide Sequence:NM_001282725.3Link to Protein Sequence:NP_001269654.1Re-query CCDS DB by Nucleotide ID:NM_001282725Re-query CCDS DB by Protein ID:NP_001269654Link to BLAST:NP_001269654.1
Original member Current member NCBI NM_001352813.2 NP_001339742.1 Accepted alive Link to Nucleotide Sequence:NM_001352813.2Link to Protein Sequence:NP_001339742.1Re-query CCDS DB by Nucleotide ID:NM_001352813Re-query CCDS DB by Protein ID:NP_001339742Link to BLAST:NP_001339742.1
Original member Current member NCBI NM_001352814.2 NP_001339743.1 Accepted alive Link to Nucleotide Sequence:NM_001352814.2Link to Protein Sequence:NP_001339743.1Re-query CCDS DB by Nucleotide ID:NM_001352814Re-query CCDS DB by Protein ID:NP_001339743Link to BLAST:NP_001339743.1
Original member Current member NCBI NM_001352815.1 NP_001339744.1 Accepted alive Link to Nucleotide Sequence:NM_001352815.1Link to Protein Sequence:NP_001339744.1Re-query CCDS DB by Nucleotide ID:NM_001352815Re-query CCDS DB by Protein ID:NP_001339744Link to BLAST:NP_001339744.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001106869.1 369 Q569K4-3 369 100% 0 0
NP_001269654.1 369 Q569K4-3 369 100% 0 0
NP_001339742.1 369 Q569K4-3 369 100% 0 0
NP_001339743.1 369 Q569K4-3 369 100% 0 0
NP_001339744.1 369 Q569K4-3 369 100% 0 0

Chromosomal Locations for CCDS 46464.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 179443250 179443468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179444876 179444977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179445550 179445728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179446525 179446770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179483272 179483434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179518528 179518638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179544827 179544916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1110 nt):
ATGATGCAGCCTTCACTGGATATCAAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGGC
TCTTTCCAAATTTTAACACAATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCAT
TCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATAGCCAGGCC
GAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACTAGACGCAACGAAAAATAAACCCA
AAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCACTCCAATCACAGGCAACAA
CTCTGACAAATCAGAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAGT
GGCTCATTTCTCCTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGCA
CAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCCAAAAAATTACTTTATTGTTCACT
ATGCAAAGTGGCTGTGAACTCCCTGTCACAGCTAGAGGCACACAACACAGGATCTAAACACAAGACCATG
GTTGAAGCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCTAGACCTGGATCAAGATTAAAGATGCAGA
ATGGCAGTAAGGGGTCAGGACTACAGAACAAGACATTTCATTGTGAAATCTGTGATGTTCATGTTAATTC
AGAAATTCAACTCAAACAGCACATTTCTAGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACCACTGAAG
CCAAAATACAGCCCTTACAACAAACTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCCAGA
AAGATATGATGAAGCCTTTGGCCCCAGCCTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCTC
AGCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCTG
AGGCCTGGGCATGGGCCCATCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGTACTAA

Translation (369 aa):
MMQPSLDIKPFMSFPVDSSSAVGLFPNFNTMDPVQKAVINHTFGVSIPPKKKQVISCNVCQLRFNSDSQA
EAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSES
GSFLLKSGTTPLPPGAATSPSKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTM
VEARNGAGPIKSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGKPLK
PKYSPYNKLQRSPSILAAKLAFQKDMMKPLAPAFLSSPLAAAAAVSSALSLPPRPSASLFQAPAIPPALL
RPGHGPIRATPASILFAPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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