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Report for CCDS12634.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12634.1 Public Homo sapiens 19 ZNF155 24 110 108 CCDS HistoryNCBI Gene:7711Re-query CCDS DB by CCDS ID:12634.1Re-query CCDS DB by GeneID:7711See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12634.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000270014.7 ENSP00000270014.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000270014.7Link to Ensembl Protein Viewer:ENSP00000270014.1Re-query CCDS DB by Nucleotide ID:ENST00000270014Re-query CCDS DB by Protein ID:ENSP00000270014
Original member Current member EBI ENST00000590615.5 ENSP00000465691.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000590615.5Link to Ensembl Protein Viewer:ENSP00000465691.1Re-query CCDS DB by Nucleotide ID:ENST00000590615Re-query CCDS DB by Protein ID:ENSP00000465691
Original member Current member EBI ENST00000611002.4 ENSP00000481677.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611002.4Link to Ensembl Protein Viewer:ENSP00000481677.1Re-query CCDS DB by Nucleotide ID:ENST00000611002Re-query CCDS DB by Protein ID:ENSP00000481677
Original member Current member NCBI NM_001260486.2 NP_001247415.2 Accepted alive Link to Nucleotide Sequence:NM_001260486.2Link to Protein Sequence:NP_001247415.2Re-query CCDS DB by Nucleotide ID:NM_001260486Re-query CCDS DB by Protein ID:NP_001247415Link to BLAST:NP_001247415.2
Original member Current member NCBI NM_001260487.2 NP_001247416.2 Accepted alive Link to Nucleotide Sequence:NM_001260487.2Link to Protein Sequence:NP_001247416.2Re-query CCDS DB by Nucleotide ID:NM_001260487Re-query CCDS DB by Protein ID:NP_001247416Link to BLAST:NP_001247416.2
Original member Current member NCBI NM_003445.4 NP_003436.4 Accepted alive Link to Nucleotide Sequence:NM_003445.4Link to Protein Sequence:NP_003436.4Re-query CCDS DB by Nucleotide ID:NM_003445Re-query CCDS DB by Protein ID:NP_003436Link to BLAST:NP_003436.4
Original member Current member NCBI NM_198089.3 NP_932355.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198089.3Link to Protein Sequence:NP_932355.3Re-query CCDS DB by Nucleotide ID:NM_198089Re-query CCDS DB by Protein ID:NP_932355Link to BLAST:NP_932355.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001247415.2 538 Q12901-1 538 100% 0 0
NP_001247416.2 538 Q12901-1 538 100% 0 0
NP_003436.4 538 Q12901-1 538 100% 0 0
NP_932355.3 538 Q12901-1 538 100% 0 0

Chromosomal Locations for CCDS 12634.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 43988544 43988558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43991548 43991674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43991842 43991934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43996093 43997474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1617 nt):
ATGACCACATTCAAGGAGGCAGTGACCTTCAAGGATGTGGCTGTGGTCTTCACTGAGGAGGAGCTGGGGC
TGCTGGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGT
GGGGCATCAACCGTTCCACCAAGATACTTGCCACTTCCTAAGGGAAGAAAAGTTTTGGATGATGGGGACA
GCAACCCAAAGAGAAGGGAATTCAGGAGGCAAGATCCAAACTGAGTTGGAGTCTGTTCCAGAAGCAGGAG
CACATGAAGAGTGGTCCTGCCAGCAAATCTGGGAACAAATTGCAAAAGACTTAACCAGGTCTCAGGACTC
TATCATAAATAACTCTCAGTTCTTTGAAAATGGTGATGTCCCCTCCCAGGTTGAAGCAGGACTACCCACA
ATTCATACAGGACAGAAACCTTCCCAGGGTGGGAAGTGTAAACAGTCCATCAGTGATGTTCCCATCTTTG
ATCTTCCTCAGCAGTTATACTCAGAAGAGAAGTCTTATACATGTGATGAGTGTGGAAAAAGCATCTGTTA
CATCTCAGCTCTTCATGTTCATCAGAGAGTCCACGTGGGAGAGAAACTCTTTATGTGTGATGTGTGTGGC
AAGGAATTTAGTCAAAGCTCACATCTGCAAACTCATCAGAGAGTCCACACTGGAGAGAAACCATTCAAAT
GTGAGCAATGTGGGAAAGGTTTCAGTCGTAGATCAGCACTTAATGTTCATCGTAAATTACACACAGGAGA
GAAACCTTACATTTGTGAGGCATGTGGGAAGGCCTTCATTCATGATTCCCAGCTTAAGGAACATAAGAGA
ATCCATACTGGGGAGAAACCATTCAAATGTGATATATGTGGTAAGACCTTCTATTTTAGGTCAAGACTTA
AGAGCCATTCCATGGTTCACACAGGAGAAAAACCATTTAGGTGTGATACATGTGATAAGAGCTTTCATCA
GAGATCAGCACTTAATAGGCATTGCATGGTCCACACAGGAGAGAAACCGTACAGATGTGAGCAGTGTGGA
AAAGGCTTTATTGGTAGGCTAGATTTTTATAAGCATCAGGTGGTCCACACAGGAGAAAAACCATATAATT
GTAAAGAATGTGGGAAGAGCTTCAGATGGTCCTCATGCCTTTTGAACCATCAGCGAGTCCACAGTGGAGA
AAAAAGCTTCAAATGTGAAGAATGTGGAAAGGGATTTTATACAAATTCACAACTGTCTTCCCATCAGAGA
TCCCACAGTGGTGAAAAGCCATATAAATGTGAGGAGTGTGGGAAGGGCTATGTTACTAAGTTTAATCTTG
ACTTGCACCAGAGGGTCCACACGGGAGAGAGACCTTATAATTGTAAGGAATGTGGGAAGAACTTTAGCCG
GGCCTCAAGTATTTTGAATCATAAGAGACTCCACTGCCAGAAAAAACCATTCAAATGTGAGGACTGTGGA
AAGAGGCTTGTACACAGGACATACCGTAAAGACCAGCCGAGAGACTATAGTGGGGAAAACCCATCCAAAT
GTGAGGATTGTGGGAGACGCTACAAGAGGCGCTTGAATCTGGATATACTTTTATCATTATTTCTAAATGA
CACATAA

Translation (538 aa):
MTTFKEAVTFKDVAVVFTEEELGLLDPAQRKLYRDVMLENFRNLLSVGHQPFHQDTCHFLREEKFWMMGT
ATQREGNSGGKIQTELESVPEAGAHEEWSCQQIWEQIAKDLTRSQDSIINNSQFFENGDVPSQVEAGLPT
IHTGQKPSQGGKCKQSISDVPIFDLPQQLYSEEKSYTCDECGKSICYISALHVHQRVHVGEKLFMCDVCG
KEFSQSSHLQTHQRVHTGEKPFKCEQCGKGFSRRSALNVHRKLHTGEKPYICEACGKAFIHDSQLKEHKR
IHTGEKPFKCDICGKTFYFRSRLKSHSMVHTGEKPFRCDTCDKSFHQRSALNRHCMVHTGEKPYRCEQCG
KGFIGRLDFYKHQVVHTGEKPYNCKECGKSFRWSSCLLNHQRVHSGEKSFKCEECGKGFYTNSQLSSHQR
SHSGEKPYKCEECGKGYVTKFNLDLHQRVHTGERPYNCKECGKNFSRASSILNHKRLHCQKKPFKCEDCG
KRLVHRTYRKDQPRDYSGENPSKCEDCGRRYKRRLNLDILLSLFLNDT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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