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Report for CCDS55111.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55111.1 Public Homo sapiens 7 SUMF2 24 110 108 CCDS HistoryNCBI Gene:25870Re-query CCDS DB by CCDS ID:55111.1Re-query CCDS DB by GeneID:25870See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 55111.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000275607.13 ENSP00000275607.9 Accepted alive Link to Ensembl Transcript Viewer:ENST00000275607.13Link to Ensembl Protein Viewer:ENSP00000275607.9Re-query CCDS DB by Nucleotide ID:ENST00000275607Re-query CCDS DB by Protein ID:ENSP00000275607
Original member Current member NCBI NM_001146333.3 NP_001139805.1 Accepted alive Link to Nucleotide Sequence:NM_001146333.3Link to Protein Sequence:NP_001139805.1Re-query CCDS DB by Nucleotide ID:NM_001146333Re-query CCDS DB by Protein ID:NP_001139805Link to BLAST:NP_001139805.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139805.1 213 Q8NBJ7-2 213 100% 0 0

Chromosomal Locations for CCDS 55111.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 56073037 56073111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56074174 56074218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56074586 56074736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56076834 56076889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56078102 56078186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56078364 56078508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56079528 56079612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (642 nt):
ATGTTTGGATGGAGCTTTGTCTTTGAGGACTTTGTCTCTGATGAGCTGAGAAACAAAGCCACCCAGCCAA
TGAAGTCTGTACTCTGGTGGCTTCCAGTGGAAAAGGCATTTTGGAGGCAGCCTGCAGGTCCTGGCTCTGG
CATCCGAGAGAGACTGGAGCACCCAGTGTTACACGTGAGCTGGAATGACGCCCGTGCCTACTGTGCTTGG
CGGGGAAAACGACTGCCCACGGAGGAAGAGTGGGAGTTTGCCGCCCGAGGGGGCTTGAAGGGTCAAGTTT
ACCCATGGGGGAACTGGTTCCAGCCAAACCGCACCAACCTGTGGCAGGGAAAGTTCCCCAAGGGAGACAA
AGCTGAGGATGGCTTCCATGGAGTCTCCCCAGTGAATGCTTTCCCCGCCCAGAACAACTACGGGCTCTAT
GACCTCCTGGGGAACGTGTGGGAGTGGACAGCATCACCGTACCAGGCTGCTGAGCAGGACATGCGCGTCC
TCCGGGGGGCATCCTGGATCGACACAGCTGATGGCTCTGCCAATCACCGGGCCCGGGTCACCACCAGGAT
GGGCAACACTCCAGATTCAGCCTCAGACAACCTCGGTTTCCGCTGTGCTGCAGACGCAGGCCGGCCGCCA
GGGGAGCTGTAA

Translation (213 aa):
MFGWSFVFEDFVSDELRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVSWNDARAYCAW
RGKRLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSPVNAFPAQNNYGLY
DLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRMGNTPDSASDNLGFRCAADAGRPP
GEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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