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Report for CCDS56472.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56472.1 Public Homo sapiens 7 WIPF3 24 110 108 CCDS HistoryNCBI Gene:644150Re-query CCDS DB by CCDS ID:56472.1Re-query CCDS DB by GeneID:644150See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56472.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000242140.10 ENSP00000242140.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000242140.10Link to Ensembl Protein Viewer:ENSP00000242140.6Re-query CCDS DB by Nucleotide ID:ENST00000242140Re-query CCDS DB by Protein ID:ENSP00000242140
Original member Current member NCBI NM_001080529.3 NP_001073998.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080529.3Link to Protein Sequence:NP_001073998.2Re-query CCDS DB by Nucleotide ID:NM_001080529Re-query CCDS DB by Protein ID:NP_001073998Link to BLAST:NP_001073998.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073998.2 483 A6NGB9 483 100% 0 0

Chromosomal Locations for CCDS 56472.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 29834725 29834814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29875830 29875962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29879009 29879140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29883850 29884593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29888068 29888217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29889306 29889407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29904286 29904362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29914493 29914516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1452 nt):
ATGCCAGTGCCACCGCCACCCCCACCTCCTCTGCCTCCACCTCCCCCGCCTCTGGGGGCTCCTCCCCCTC
CCCCACCATCAGCACCCCCGGTAAGCACAGACACCTCCAGCTTGCGAAGGGCAGATCCGAAAGGCCGGAG
TGCGCTGTTGGCTGATATCCAGCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAACGACCGCAGTGCC
CCGCAGATCGAGAGTTCTAAAGGAACCAACAAAGAAGGAGGAGGTTCTGCAAACACACGAGGCGCGAGCA
CACCTCCCACCCTGGGAGATCTGTTTGCTGGTGGCTTTCCTGTATTGCGACCAGCAGGCCAGCGGGATGT
AGCAGGTGGCAAGACAGGGCAGGGCCCTGGCTCCCGCGCGCCCTCTCCCAGGCTTCCCAACAAAACCATC
AGCGGCCCGCTTATCCCGCCTGCCTCTCCCAGGCTAGGCAATACCTCCGAGGCGCATGGCGCTGCCAGGA
CAGCCCCGCCTCGCCCCAACGTGCCTGCCCCGCCCCCTCCCACCCCACCCCCTCCGCCTCCACCCTTACC
CCCGCCCCTTCCCTCTTCCTCCCCCATCAAAACTCCGCTTGTGTCCCCACCCGGCCCACTGACCAAAGGG
AACCTCCCGGTGGTTGCACCCCCCGTCCCCTGTGCGCCACCACCTCCACCTCCGCCACCTCCCCCAACGC
CACCCCCGCTGCCCCCGGCCTCGGTTCTTAGTGACAAGGCAGTGAAGCCTCAGCTGGCTCCCTTGCACCT
CCCGCCCATCCCGCCCCCGCTCCCTCTGCTCCCACCTTGTGGGTATCCGGGGCTCAAAGCGGAGCCCGCC
AGCCCTGCGCAAGATGCGCAGGAGCCTCCCGCCCCGCCGCCCCCGCTCCCCCCTTATGCTTCTTGCTCCC
CGAGGGCTTCTTTGCCCGCGCCCCCTTTGCCAGGAGTTAATAGCAGCAGTGAAACTCCACCCCCGCTACC
CCCTAAATCCCCCAGCTTCCAGGCCCCACCGCAGAAGGCCGGTGCGCAGGCCTTGCCCGCCCCGCCTGCC
CCTCCGGGCTCCCAGCCGTTCCTGCAGAAGAAGAGGCATGGCCGACCAGGGGCCGGTGGGGGAAAGCTAA
ATCCACCTCCAGCACCCCCTGCGAGATCACCTACCACAGAGCTTTCAAGCAAGAGCCAGCAGGCCACAGC
CTGGACCCCGACGCAGCAGCCTGGAGGTCAACTGCGAAATGGAAGCCTGCACATCATTGATGACTTCGAG
TCTAAATTCACGTTCCATTCTGTGGAAGACTTTCCCCCTCCGGATGAATATAAACCATGCCAGAAGATTT
ACCCCAGCAAGATCCCCAGAAGCCGTACACCTGGTCCCTGGCTCCAAGCGGAAGCAGTCGGGCAGAGCTC
TGATGACATCAAAGGCAGAAATTCTCAGTTATCTCTAAAGACTCTTCGGTGA

Translation (483 aa):
MPVPPPPPPPLPPPPPPLGAPPPPPPSAPPVSTDTSSLRRADPKGRSALLADIQQGTRLRKVTQINDRSA
PQIESSKGTNKEGGGSANTRGASTPPTLGDLFAGGFPVLRPAGQRDVAGGKTGQGPGSRAPSPRLPNKTI
SGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKG
NLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPA
SPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPPA
PPGSQPFLQKKRHGRPGAGGGKLNPPPAPPARSPTTELSSKSQQATAWTPTQQPGGQLRNGSLHIIDDFE
SKFTFHSVEDFPPPDEYKPCQKIYPSKIPRSRTPGPWLQAEAVGQSSDDIKGRNSQLSLKTLR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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