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Report for CCDS43458.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43458.1 Public Homo sapiens 6 BTBD9 24 110 108 CCDS HistoryNCBI Gene:114781Re-query CCDS DB by CCDS ID:43458.1Re-query CCDS DB by GeneID:114781See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43458.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314100.10 ENSP00000323408.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000314100.10Link to Ensembl Protein Viewer:ENSP00000323408.6Re-query CCDS DB by Nucleotide ID:ENST00000314100Re-query CCDS DB by Protein ID:ENSP00000323408
Original member Current member NCBI NM_152733.3 NP_689946.2 Accepted alive Link to Nucleotide Sequence:NM_152733.3Link to Protein Sequence:NP_689946.2Re-query CCDS DB by Nucleotide ID:NM_152733Re-query CCDS DB by Protein ID:NP_689946Link to BLAST:NP_689946.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689946.2 544 Q96Q07-3 544 100% 0 0

Chromosomal Locations for CCDS 43458.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 38174985 38175182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38192519 38192597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38256409 38256516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38288272 38288461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38344984 38345093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38577600 38577719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38580218 38580437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38592576 38592840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 38593964 38594308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGCGAGAGTCTCAGCCTGAAGCAGAAATTCCTCTCCAAGACACCACTGCAGAAGCATTCACAATGCTAC
TCAAATATATCTACACTGGGCGGGCAACGCTGACAGATGAGAAGGAGGAGGTGCTGCTGGACTTTTTGAG
CCTGGCTCATAAATATGGATTTCCAGAGCTAGAGGATTCTACCTCTGAGTATCTCTGCACCATACTTAAC
ATTCAGAATGTCTGCATGACTTTTGATGTTGCCAGTCTCTACTCACTTCCCAAGTTAACTTGTATGTGCT
GCATGTTTATGGATAGGAATGCTCAGGAAGTCCTCTCAAGTGAAGGTTTCCTCTCCCTTTCTAAGACAGC
ACTTTTAAACATCGTGTTAAGAGACTCATTTGCAGCTCCCGAAAAAGATATTTTCCTAGCCTTATTAAAC
TGGTGTAAGCACAATTCAAAGGAGAATCATGCTGAAATCATGCAGGCTGTGCGTTTACCTCTCATGAGCC
TCACAGAGCTTCTGAATGTTGTGAGGCCTTCAGGACTGCTGTCTCCTGATGCCATCCTGGATGCCATTAA
AGTGCGATCTGAGAGCCGGGATATGGACCTCAATTATAGAGGCATGCTCATACCAGAAGAAAACATTGCA
ACTATGAAGTATGGAGCCCAAGTTGTAAAGGGGGAGCTGAAATCAGCCTTATTAGATGGTGATACTCAAA
ATTATGATTTGGATCATGGATTTTCAAGGCACCCAATTGATGATGACTGCCGTTCCGGCATCGAGATTAA
GCTAGGTCAGCCATCCATTATCAATCACATACGGATACTCTTGTGGGACCGAGATAGCCGGTCTTACTCA
TACTTCATTGAAGTGTCAATGGATGAACTTGATTGGGTCAGAGTGATAGATCATTCACAATATCTGTGTC
GTTCTTGGCAGAAATTATATTTTCCAGCCCGTGTCTGCAGGTATATTCGAATTGTTGGGACTCACAACAC
AGTGAACAAGATTTTTCACATTGTGGCTTTTGAATGTATGTTTACAAACAAAACCTTCACTCTTGAGAAG
GGGCTGATAGTTCCCATGGAGAATGTTGCAACAATTGCTGATTGTGCCAGTGTGATTGAAGGAGTCAGTC
GGAGCCGAAATGCCTTGCTGAATGGGGACACTAAGAATTATGACTGGGATTCTGGCTACACATGTCACCA
GCTAGGAAGTGGTGCGATTGTGGTTCAGTTGGCACAACCGTACATGATTGGGTCAATACGGTTACTACTT
TGGGATTGTGATGATCGAAGCTATAGCTACTACGTTGAGGTTTCTACCAACCAGCAACAGTGGACCATGG
TTGCTGACAGAACTAAAGTCTCCTGCAAGTCCTGGCAGTCAGTAACTTTTGAAAGGCAGCCTGCCTCCTT
CATCCGTATCGTTGGGACACACAACACAGCAAATGAGGTGTTCCACTGTGTCCACTTTGAGTGTCCAGAG
CAGCAGAGCAGCCAGAAGGAGGAAAATAGTGAGGAATCGGGGACAGGGGACACCAGCCTGGCCGGTCAGC
AGCTCGACTCCCATGCGCTGCGGGCGCCTAGTGGCAGCTCACTACCCTCCAGCCCAGGCTCCAACTCACG
CTCCCCCAACCGGCAGCACCAATAA

Translation (544 aa):
MRESQPEAEIPLQDTTAEAFTMLLKYIYTGRATLTDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILN
IQNVCMTFDVASLYSLPKLTCMCCMFMDRNAQEVLSSEGFLSLSKTALLNIVLRDSFAAPEKDIFLALLN
WCKHNSKENHAEIMQAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSESRDMDLNYRGMLIPEENIA
TMKYGAQVVKGELKSALLDGDTQNYDLDHGFSRHPIDDDCRSGIEIKLGQPSIINHIRILLWDRDSRSYS
YFIEVSMDELDWVRVIDHSQYLCRSWQKLYFPARVCRYIRIVGTHNTVNKIFHIVAFECMFTNKTFTLEK
GLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQLGSGAIVVQLAQPYMIGSIRLLL
WDCDDRSYSYYVEVSTNQQQWTMVADRTKVSCKSWQSVTFERQPASFIRIVGTHNTANEVFHCVHFECPE
QQSSQKEENSEESGTGDTSLAGQQLDSHALRAPSGSSLPSSPGSNSRSPNRQHQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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