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Report for CCDS33772.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33772.1 Public Homo sapiens 3 PDE12 24 110 108 CCDS HistoryNCBI Gene:201626Re-query CCDS DB by CCDS ID:33772.1Re-query CCDS DB by GeneID:201626See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33772.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311180.9 ENSP00000309142.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311180.9Link to Ensembl Protein Viewer:ENSP00000309142.7Re-query CCDS DB by Nucleotide ID:ENST00000311180Re-query CCDS DB by Protein ID:ENSP00000309142
Original member Current member NCBI NM_177966.7 NP_808881.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_177966.7Link to Protein Sequence:NP_808881.3Re-query CCDS DB by Nucleotide ID:NM_177966Re-query CCDS DB by Protein ID:NP_808881Link to BLAST:NP_808881.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808881.3 609 Q6L8Q7-1 609 100% 0 0

Chromosomal Locations for CCDS 33772.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 57556380 57557687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57559310 57559388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57559562 57560004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1830 nt):
ATGTGGAGGCTCCCAGGCGCCCGCGCCGCGCTTCGGGTGATCCGGACGGCGGTGGAGAAGCTGAGCCGGG
CTGAAGCGGGGAGCCAGACAGCGGCGGGAGCGATGGAGCGCGCTGTAGTGCGCTGCGTACCTTCGGAACC
CAAGCTGAGCCTGTCATTCGCTTTGGCTGATGGTAGCCACAAGAACATGCAGCGCGACCAGAGCGAGCCG
CTGGGTCGAGTCCTCAGCCGCATCGCTACCAATGCCCTAAAGGGTCACGCTAAGGCGGCCGCCGCCAAGA
AGAGCAGGAAGAGCCGGCCGAATGCTAGCGGCGGTGCGGCCTGTTCAGGGCCGGGGCCTGAGCCGGCTGT
GTTCTGCGAGCCCGTGGTGAAGCTGTACTACCGGGAAGAGGCAGTGGCTGAGGACGTGCTCAACGTGGAT
GCCTGGCAAGACGGCGCGGTGCTGCAGATCGGCGATGTTAAGTACAAGGTGGAGCGCAACCCGCCCGCCT
TCACCGAACTGCAGTTGCCGCGCTACATCATGGCCGGGTTCCCTGTGTGCCCCAAACTCAGCCTCGAATT
TGGGGATCCCGCCAGCTCCCTTTTCCGCTGGTATAAGGAAGCCAAGCCCGGAGCGGCGGAGCCCGAGGTC
GGTGTCCCCTCGTCATTGTCTCCCTCCTCACCTTCTTCTTCTTGGACTGAGACTGATGTGGAGGAGCGTG
TCTACACCCCGTCCAATGCCGACATCGGGCTAAGGCTCAAGCTTCACTGCACCCCAGGCGATGGGCAGCG
CTTTGGGCACAGCCGGGAGTTGGAAAGTGTGTGTGTGGTAGAGGCTGGGCCTGGCACCTGCACTTTTGAC
CACCGGCATCTCTACACGAAGAAGGTGACTGAGGACGCTCTCATCCGCACTGTCTCTTACAACATCCTGG
CAGACACGTACGCGCAGACTGAGTTCTCGCGAACGGTTCTGTACCCATACTGTGCCCCCTACGCCCTGGA
GCTCGACTACCGCCAGAACCTTATCCAGAAGGAACTCACCGGCTACAACGCCGATGTCATCTGTTTGCAG
GAGGTTGACCGCGCAGTGTTTTCTGACAGCTTGGTACCCGCCCTAGAGGCCTTCGGGCTCGAGGGGGTGT
TTCGAATCAAGCAGCACGAAGGCCTGGCCACTTTCTACCGAAAGTCTAAGTTCAGCCTTCTTAGCCAGCA
TGACATTTCATTCTACGAAGCCCTCGAGTCCGACCCACTTCACAAAGAACTGCTGGAGAAACTAGTTTTG
TACCCATCAGCGCAGGAGAAGGTGCTCCAGAGATCTTCTGTTCTTCAGGTTTCAGTTCTTCAGTCTACAA
AGGACTCTTCTAAAAGGATATGTGTTGCTAATACCCATCTTTACTGGCATCCTAAAGGTGGGTATATTCG
CCTCATTCAAATGGCAGTAGCCTTGGCTCACATAAGACATGTTTCATGTGATCTGTATCCTGGCATACCA
GTTATATTTTGTGGGGACTTTAATAGTACACCATCAACAGGAATGTATCATTTTGTCATCAATGGCAGCA
TTCCAGAGGATCATGAAGACTGGGCTTCCAATGGGGAGGAGGAAAGATGCAATATGTCTCTTACACATTT
CTTCAAGCTGAAAAGTGCTTGTGGTGAACCTGCTTACACAAATTATGTTGGTGGCTTTCATGGATGTCTA
GATTACATTTTCATTGACTTAAATGCTTTAGAGGTTGAACAGGTGATTCCATTACCTAGTCATGAAGAAG
TTACCACCCACCAGGCCTTACCTAGTGTTTCCCATCCCTCTGATCACATAGCACTTGTATGTGATTTAAA
ATGGAAATAG

Translation (609 aa):
MWRLPGARAALRVIRTAVEKLSRAEAGSQTAAGAMERAVVRCVPSEPKLSLSFALADGSHKNMQRDQSEP
LGRVLSRIATNALKGHAKAAAAKKSRKSRPNASGGAACSGPGPEPAVFCEPVVKLYYREEAVAEDVLNVD
AWQDGAVLQIGDVKYKVERNPPAFTELQLPRYIMAGFPVCPKLSLEFGDPASSLFRWYKEAKPGAAEPEV
GVPSSLSPSSPSSSWTETDVEERVYTPSNADIGLRLKLHCTPGDGQRFGHSRELESVCVVEAGPGTCTFD
HRHLYTKKVTEDALIRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQ
EVDRAVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSKFSLLSQHDISFYEALESDPLHKELLEKLVL
YPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRLIQMAVALAHIRHVSCDLYPGIP
VIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEERCNMSLTHFFKLKSACGEPAYTNYVGGFHGCL
DYIFIDLNALEVEQVIPLPSHEEVTTHQALPSVSHPSDHIALVCDLKWK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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