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Report for CCDS81566.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81566.1 Public Homo sapiens 11 KBTBD4 24 110 108 CCDS HistoryNCBI Gene:55709Re-query CCDS DB by CCDS ID:81566.1Re-query CCDS DB by GeneID:55709See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81566.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000533290.5 ENSP00000436713.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000533290.5Link to Ensembl Protein Viewer:ENSP00000436713.1Re-query CCDS DB by Nucleotide ID:ENST00000533290Re-query CCDS DB by Protein ID:ENSP00000436713
Original member Current member NCBI NM_001318718.2 NP_001305647.1 Accepted alive Link to Nucleotide Sequence:NM_001318718.2Link to Protein Sequence:NP_001305647.1Re-query CCDS DB by Nucleotide ID:NM_001318718Re-query CCDS DB by Protein ID:NP_001305647Link to BLAST:NP_001305647.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305647.1 543 Q9NVX7-3 543 100% 0 0

Chromosomal Locations for CCDS 81566.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 47572930 47573790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47575593 47575699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47577411 47578074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1632 nt):
ATGGCTGTGAATTCCTCAGGTTACTCAAGATGGTGTTGCTTTGCAGACAGCTGGCAGAGAGAGAAGTTGG
CTAGCATGGAATCACCAGAGGAGCCTGGAGCATCCATGGATGAGAACTACTTTGTGAACTACACTTTCAA
AGATCGGTCACATTCAGGCCGTGTGGCTCAAGGCATCATGAAACTGTGTCTAGAGGAGGAGCTCTTTGCT
GATGTCACCATTTCGGTGGAAGGCCGGGAGTTTCAGCTCCATCGGCTGGTCCTCTCAGCTCAGAGCTGCT
TCTTCCGATCCATGTTCACTTCCAACCTGAAGGAGGCCCACAACCGGGTGATTGTGCTGCAGGATGTCAG
CGAGTCTGTTTTCCAGCTCCTGGTTGATTATATCTACCATGGGACTGTGAAACTTCGAGCTGAGGAGTTG
CAGGAAATTTATGAGGTGTCAGACATGTATCAGCTGACATCTCTCTTTGAGGAATGCTCTCGGTTTTTGG
CCCGCACAGTGCAAGTGGGAAACTGCCTTCAGGTGATGTGGCTGGCAGATCGGCACAGTGATCCTGAGCT
CTATACGGCTGCCAAGCACTGTGCCAAGACCCACCTGGCCCAGCTGCAGAATACAGAGGAATTTCTCCAC
TTGCCCCACCGCTTACTCACAGATATCATCTCGGATGGAGTTCCGTGTTCTCAGAACCCAACAGAGGCAA
TAGAAGCCTGGATCAACTTTAATAAAGAGGAAAGAGAGGCTTTTGCAGAGTCACTCAGGACAAGCTTGAA
GGAAATTGGGGAGAATGTGCACATTTACCTGATTGGGAAAGAGTCATCTCGTACCCACTCGTTGGCTGTG
TCCTTGCACTGTGCAGAAGATGACTCCATCAGTGTAAGTGGCCAAAACAGTTTGTGCCACCAGATCACTG
CGGCCTGCAAGCATGGTGGAGACTTGTATGTGGTGGGAGGGTCCATCCCACGGCGCATGTGGAAGTGCAA
CAATGCCACCGTTGACTGGGAGTGGTGTGCTCCTTTGCCTCGGGACCGGCTCCAGCACACCCTGGTGTCT
GTGCCCGGGAAAGATGCCATATATTCACTGGGTGGCAAGACACTGCAAGATACCCTCTCCAACGCAGTCA
TTTATTATCGCGTAGGTGATAATGTGTGGACAGAGACAACTCAGCTAGAGGTGGCTGTGTCAGGGGCTGC
TGGTGCCAACCTCAACGGGATCATCTACTTACTAGGGGGGGAGGAGAATGATCTGGACTTCTTTACCAAA
CCTTCCCGACTCATCCAGTGCTTTGACACAGAGACAGACAAATGCCATGTGAAGCCCTATGTGCTGCCCT
TTGCAGGCCGCATGCACGCAGCTGTGCATAAAGATCTGGTGTTCATCGTGGCTGAAGGGGACTCCCTGGT
GTGCTACAATCCCTTGCTAGACAGCTTCACCCGGCTTTGCCTTCCTGAGGCCTGGAGCTCTGCCCCATCC
CTCTGGAAGATTGCCAGCTGTAACGGGAGCATCTATGTCTTCCGGGACCGATATAAAAAGGGGGATGCCA
ACACCTACAAGCTTGACCCTGCCACTTCAGCCGTAACTGTCACAAGAGGTATTAAGGTGCTGCTTACCAA
TTTGCAGTTTGTGTTGGCCTAA

Translation (543 aa):
MAVNSSGYSRWCCFADSWQREKLASMESPEEPGASMDENYFVNYTFKDRSHSGRVAQGIMKLCLEEELFA
DVTISVEGREFQLHRLVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAEEL
QEIYEVSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLH
LPHRLLTDIISDGVPCSQNPTEAIEAWINFNKEEREAFAESLRTSLKEIGENVHIYLIGKESSRTHSLAV
SLHCAEDDSISVSGQNSLCHQITAACKHGGDLYVVGGSIPRRMWKCNNATVDWEWCAPLPRDRLQHTLVS
VPGKDAIYSLGGKTLQDTLSNAVIYYRVGDNVWTETTQLEVAVSGAAGANLNGIIYLLGGEENDLDFFTK
PSRLIQCFDTETDKCHVKPYVLPFAGRMHAAVHKDLVFIVAEGDSLVCYNPLLDSFTRLCLPEAWSSAPS
LWKIASCNGSIYVFRDRYKKGDANTYKLDPATSAVTVTRGIKVLLTNLQFVLA


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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