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Report for CCDS14249.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14249.1 Public Homo sapiens X MID1IP1 24 110 108 CCDS HistoryNCBI Gene:58526Re-query CCDS DB by CCDS ID:14249.1Re-query CCDS DB by GeneID:58526See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14249.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336949.7 ENSP00000338706.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000336949.7Link to Ensembl Protein Viewer:ENSP00000338706.6Re-query CCDS DB by Nucleotide ID:ENST00000336949Re-query CCDS DB by Protein ID:ENSP00000338706
Original member Current member EBI ENST00000378474.3 ENSP00000367735.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378474.3Link to Ensembl Protein Viewer:ENSP00000367735.3Re-query CCDS DB by Nucleotide ID:ENST00000378474Re-query CCDS DB by Protein ID:ENSP00000367735
Original member Current member EBI ENST00000457894.5 ENSP00000416670.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000457894.5Link to Ensembl Protein Viewer:ENSP00000416670.1Re-query CCDS DB by Nucleotide ID:ENST00000457894Re-query CCDS DB by Protein ID:ENSP00000416670
Original member Current member EBI ENST00000614558.3 ENSP00000483547.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000614558.3Link to Ensembl Protein Viewer:ENSP00000483547.1Re-query CCDS DB by Nucleotide ID:ENST00000614558Re-query CCDS DB by Protein ID:ENSP00000483547
Original member Current member NCBI NM_001098790.2 NP_001092260.1 Accepted alive Link to Nucleotide Sequence:NM_001098790.2Link to Protein Sequence:NP_001092260.1Re-query CCDS DB by Nucleotide ID:NM_001098790Re-query CCDS DB by Protein ID:NP_001092260Link to BLAST:NP_001092260.1
Original member Current member NCBI NM_001098791.2 NP_001092261.1 Accepted alive Link to Nucleotide Sequence:NM_001098791.2Link to Protein Sequence:NP_001092261.1Re-query CCDS DB by Nucleotide ID:NM_001098791Re-query CCDS DB by Protein ID:NP_001092261Link to BLAST:NP_001092261.1
Original member Current member NCBI NM_021242.6 NP_067065.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021242.6Link to Protein Sequence:NP_067065.1Re-query CCDS DB by Nucleotide ID:NM_021242Re-query CCDS DB by Protein ID:NP_067065Link to BLAST:NP_067065.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092260.1 183 Q9NPA3 183 100% 0 0
NP_001092261.1 183 Q9NPA3 183 100% 0 0
NP_067065.1 183 Q9NPA3 183 100% 0 0

Chromosomal Locations for CCDS 14249.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 38804947 38805498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (552 nt):
ATGATGCAAATCTGCGACACCTACAACCAGAAGCACTCGCTCTTTAACGCCATGAATCGCTTCATTGGCG
CCGTGAACAACATGGACCAGACGGTGATGGTGCCCAGCTTGCTGCGCGACGTGCCCCTGGCTGACCCCGG
GTTAGACAACGATGTTGGCGTGGAGGTAGGCGGCAGTGGCGGCTGCCTGGAGGAGCGCACGCCCCCAGTC
CCCGACTCGGGAAGCGCCAATGGCAGCTTTTTCGCGCCCTCTCGGGACATGTACAGCCACTACGTGCTTC
TCAAGTCCATCCGCAACGACATCGAGTGGGGGGTCCTGCACCAGCCGCCTCCACCGGCTGGGAGCGAGGA
GGGCAGTGCCTGGAAGTCCAAGGACATCCTGGTGGACCTGGGCCACTTGGAGGGTGCGGACGCCGGCGAA
GAAGACCTGGAACAGCAGTTCCACTACCACCTGCGCGGGCTGCACACTGTGCTCTCGAAACTCACGCGCA
AAGCCAACATCCTCACTAACAGATACAAGCAGGAGATCGGCTTCGGCAATTGGGGCCACTGA

Translation (183 aa):
MMQICDTYNQKHSLFNAMNRFIGAVNNMDQTVMVPSLLRDVPLADPGLDNDVGVEVGGSGGCLEERTPPV
PDSGSANGSFFAPSRDMYSHYVLLKSIRNDIEWGVLHQPPPPAGSEEGSAWKSKDILVDLGHLEGADAGE
EDLEQQFHYHLRGLHTVLSKLTRKANILTNRYKQEIGFGNWGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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