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Report for CCDS45318.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45318.1 Public Homo sapiens 15 HYKK 24 110 108 CCDS HistoryNCBI Gene:123688Re-query CCDS DB by CCDS ID:45318.1Re-query CCDS DB by GeneID:123688See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45318.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000408962.6 ENSP00000386197.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000408962.6Link to Ensembl Protein Viewer:ENSP00000386197.2Re-query CCDS DB by Nucleotide ID:ENST00000408962Re-query CCDS DB by Protein ID:ENSP00000386197
Original member Current member EBI ENST00000563233.2 ENSP00000454850.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000563233.2Link to Ensembl Protein Viewer:ENSP00000454850.1Re-query CCDS DB by Nucleotide ID:ENST00000563233Re-query CCDS DB by Protein ID:ENSP00000454850
Original member Current member NCBI NM_001083612.2 NP_001077081.1 Accepted alive Link to Nucleotide Sequence:NM_001083612.2Link to Protein Sequence:NP_001077081.1Re-query CCDS DB by Nucleotide ID:NM_001083612Re-query CCDS DB by Protein ID:NP_001077081Link to BLAST:NP_001077081.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001077081.1 220 A2RU49-3 220 100% 0 0

Chromosomal Locations for CCDS 45318.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 78513089 78513425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78514968 78515107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78527380 78527563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78537300 78537301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (663 nt):
ATGTCAAGTGGAAACTATCAGCAGTCAGAGGCTCTTAGCAAACCCACTTTCAGTGAGGAACAAGCCTCTG
CGTTAGTGGAGTCAGTGTTTGGGTTGAAAGTTTCCAAGGTCCGGCCACTTCCTAGCTATGATGACCAAAA
CTTTCATGTCTACGTTTCAAAAACCAAAGATGGCCCAACTGAATATGTCCTCAAAATAAGCAACACCAAG
GCTAGCAAAAATCCAGACCTGATTGAAGTGCAGAATCACATCATCATGTTTCTGAAAGCCGCTGGATTTC
CAACAGCCTCTGTGTGTCACACTAAAGGAGACAACACAGCTTCTCTCGTGTCTGTAGATAGTGGCTCTGA
AATCAAAAGCTACTTGGTGAGGCTGCTGACTTACCTCCCAGGAAGACCCATCGCTGAGCTTCCCGTCAGC
CCCCAGCTATTGTATGAAATTGGAAAACTAGCTGCCAAATTGGATAAGACACTGCAGAGATTCCATCACC
CAAAGTTAAGTAGTCTTCATCGGGAGAACTTCATCTGGAATCTGAAAAATGTTCCTCTTCTGGAGAAATA
CCTGTATGCCCTGGGCCAGAATCGAAACCGAGAGATTGTTGAGCATGTCATTCATCTGTTCAAGGAGGAA
GTAATGACCAAATTAAGTCATTTTCGAGAATGA

Translation (220 aa):
MSSGNYQQSEALSKPTFSEEQASALVESVFGLKVSKVRPLPSYDDQNFHVYVSKTKDGPTEYVLKISNTK
ASKNPDLIEVQNHIIMFLKAAGFPTASVCHTKGDNTASLVSVDSGSEIKSYLVRLLTYLPGRPIAELPVS
PQLLYEIGKLAAKLDKTLQRFHHPKLSSLHRENFIWNLKNVPLLEKYLYALGQNRNREIVEHVIHLFKEE
VMTKLSHFRE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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