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Report for CCDS69664.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69664.1 Public Homo sapiens 9 ZNF79 24 110 108 CCDS HistoryNCBI Gene:7633Re-query CCDS DB by CCDS ID:69664.1Re-query CCDS DB by GeneID:7633See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 69664.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000543471.5 ENSP00000438418.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000543471.5Link to Ensembl Protein Viewer:ENSP00000438418.1Re-query CCDS DB by Nucleotide ID:ENST00000543471Re-query CCDS DB by Protein ID:ENSP00000438418
Original member Current member EBI ENST00000612342.4 ENSP00000478201.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000612342.4Link to Ensembl Protein Viewer:ENSP00000478201.1Re-query CCDS DB by Nucleotide ID:ENST00000612342Re-query CCDS DB by Protein ID:ENSP00000478201
Original member Current member NCBI NM_001286696.2 NP_001273625.1 Accepted alive Link to Nucleotide Sequence:NM_001286696.2Link to Protein Sequence:NP_001273625.1Re-query CCDS DB by Nucleotide ID:NM_001286696Re-query CCDS DB by Protein ID:NP_001273625Link to BLAST:NP_001273625.1
Original member Current member NCBI NM_001286697.2 NP_001273626.1 Accepted alive Link to Nucleotide Sequence:NM_001286697.2Link to Protein Sequence:NP_001273626.1Re-query CCDS DB by Nucleotide ID:NM_001286697Re-query CCDS DB by Protein ID:NP_001273626Link to BLAST:NP_001273626.1
Original member Current member NCBI NM_001322260.2 NP_001309189.1 Accepted alive Link to Nucleotide Sequence:NM_001322260.2Link to Protein Sequence:NP_001309189.1Re-query CCDS DB by Nucleotide ID:NM_001322260Re-query CCDS DB by Protein ID:NP_001309189Link to BLAST:NP_001309189.1

Chromosomal Locations for CCDS 69664.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 127428888 127428920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127435090 127435216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127435908 127436003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127444029 127445197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1425 nt):
ATGGCTGCTGGTCTCCTCACAGCTGGGCCCCGGGGATCCACATTCTTCAGCAGTGTGACGGTAGCTTTTG
CACAGGAAAGGTGGAGGTGCCTCGTGTCTACTCCACGGGACAGGTTCAAGGAGGGGATACCAGGAAAGTC
CAGGAGCCTTGTCCTACTAGGACTTCCAGTTTCCCAGCCTGGCATGAACTCCCAGTTGGAACAAAGGGAA
GGCGCATGGATGCTGGAGGGCGAAGACCTGCGAAGTCCCTCTCCAGGCTGGAAGATTATATCTGGATCAC
CACCAGAGCAAGCCCTTTCTGAAGCTTCATTCCAAGACCCATGTGTAGAGATGCCCCCTGGGGATTCAGA
CCACGGGACCAGTGACCTTGAGAAGAGCTTCAATCTGAGACCAGTCCTCTCTCCGCAACAGAGAGTGCCC
GTGGAAGCGAGACCTCGCAAATGTGAGACACACACCGAGAGCTTCAAGAACTCGGAAATCCTGAAACCTC
ACAGAGCAAAACCATATGCATGTAATGAATGTGGCAAAGCCTTCAGTTACTGTTCTTCCCTTTCTCAGCA
TCAGAAGAGCCACACTGGAGAGAAGCCCTATGAGTGCAGTGAATGTGGGAAGGCCTTCAGCCAGAGCTCA
TCTCTCATTCAGCACCAGAGGATTCACACTGGAGAGAAGCCTTACAAGTGCAGTGAATGTGGAAGAGCCT
TCAGCCAGAACGCCAACCTCACCAAACACCAGCGAACCCACACCGGAGAGAAGCCCTACAGATGCAGCGA
GTGTGAGAAAGCCTTCAGTGACTGCTCAGCTCTTGTTCAGCATCAGAGAATTCATACCGGAGAGAAGCCC
TACGAATGCAGCGACTGTGGGAAGGCCTTCCGTCACAGTGCAAACCTCACGAACCATCAGAGGACTCACA
CCGGGGAGAAGCCCTACAAGTGCAGCGAGTGTGGGAAGGCCTTCAGTTACTGCGCAGCGTTCATTCAGCA
CCAGAGGATTCACACCGGGGAGAAGCCCTACAGATGTGCCGCGTGTGGGAAGGCCTTCAGCCAGAGTGCA
AACCTCACAAACCATCAGAGGACTCACACTGGGGAGAAACCCTACAAGTGCAGCGAGTGTGGGAAGGCCT
TCAGCCAGAGTACCAATCTCATAATCCACCAAAAGACCCACACCGGGGAGAAGCCATATAAATGTAATGA
ATGTGGGAAATTCTTCAGTGAGAGCTCAGCCCTCATTCGGCATCATATAATCCACACCGGAGAAAAACCT
TATGAGTGTAATGAGTGTGGTAAAGCGTTTAACCAGAGCTCATCCCTTAGTCAGCATCAGAGAATCCACA
CAGGCGTGAAACCCTACGAATGCAGCGAGTGTGGGAAGGCCTTCCGGTGCAGCTCTGCCTTCGTTAGACA
TCAGAGACTCCACGCCGGAGAGTAA

Translation (474 aa):
MAAGLLTAGPRGSTFFSSVTVAFAQERWRCLVSTPRDRFKEGIPGKSRSLVLLGLPVSQPGMNSQLEQRE
GAWMLEGEDLRSPSPGWKIISGSPPEQALSEASFQDPCVEMPPGDSDHGTSDLEKSFNLRPVLSPQQRVP
VEARPRKCETHTESFKNSEILKPHRAKPYACNECGKAFSYCSSLSQHQKSHTGEKPYECSECGKAFSQSS
SLIQHQRIHTGEKPYKCSECGRAFSQNANLTKHQRTHTGEKPYRCSECEKAFSDCSALVQHQRIHTGEKP
YECSDCGKAFRHSANLTNHQRTHTGEKPYKCSECGKAFSYCAAFIQHQRIHTGEKPYRCAACGKAFSQSA
NLTNHQRTHTGEKPYKCSECGKAFSQSTNLIIHQKTHTGEKPYKCNECGKFFSESSALIRHHIIHTGEKP
YECNECGKAFNQSSSLSQHQRIHTGVKPYECSECGKAFRCSSAFVRHQRLHAGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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