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Report for CCDS7919.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7919.1 Public Homo sapiens 11 MDK 24 110 108 CCDS HistoryNCBI Gene:4192Re-query CCDS DB by CCDS ID:7919.1Re-query CCDS DB by GeneID:4192See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7919.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359803.7 ENSP00000352852.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359803.7Link to Ensembl Protein Viewer:ENSP00000352852.2Re-query CCDS DB by Nucleotide ID:ENST00000359803Re-query CCDS DB by Protein ID:ENSP00000352852
Original member Current member EBI ENST00000395565.5 ENSP00000378932.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395565.5Link to Ensembl Protein Viewer:ENSP00000378932.1Re-query CCDS DB by Nucleotide ID:ENST00000395565Re-query CCDS DB by Protein ID:ENSP00000378932
Original member Current member EBI ENST00000395566.9 ENSP00000378933.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395566.9Link to Ensembl Protein Viewer:ENSP00000378933.4Re-query CCDS DB by Nucleotide ID:ENST00000395566Re-query CCDS DB by Protein ID:ENSP00000378933
Original member Current member EBI ENST00000407067.1 ENSP00000384034.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407067.1Link to Ensembl Protein Viewer:ENSP00000384034.1Re-query CCDS DB by Nucleotide ID:ENST00000407067Re-query CCDS DB by Protein ID:ENSP00000384034
Original member Current member EBI ENST00000405308.6 ENSP00000385451.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405308.6Link to Ensembl Protein Viewer:ENSP00000385451.2Re-query CCDS DB by Nucleotide ID:ENST00000405308Re-query CCDS DB by Protein ID:ENSP00000385451
Original member Current member NCBI NM_001012333.3 NP_001012333.1 Accepted alive Link to Nucleotide Sequence:NM_001012333.3Link to Protein Sequence:NP_001012333.1Re-query CCDS DB by Nucleotide ID:NM_001012333Re-query CCDS DB by Protein ID:NP_001012333Link to BLAST:NP_001012333.1
Original member Current member NCBI NM_001012334.2 NP_001012334.1 Accepted alive Link to Nucleotide Sequence:NM_001012334.2Link to Protein Sequence:NP_001012334.1Re-query CCDS DB by Nucleotide ID:NM_001012334Re-query CCDS DB by Protein ID:NP_001012334Link to BLAST:NP_001012334.1
Original member Current member NCBI NM_001270550.1 NP_001257479.1 Accepted alive Link to Nucleotide Sequence:NM_001270550.1Link to Protein Sequence:NP_001257479.1Re-query CCDS DB by Nucleotide ID:NM_001270550Re-query CCDS DB by Protein ID:NP_001257479Link to BLAST:NP_001257479.1
Original member Current member NCBI NM_001270551.3 NP_001257480.1 Accepted alive Link to Nucleotide Sequence:NM_001270551.3Link to Protein Sequence:NP_001257480.1Re-query CCDS DB by Nucleotide ID:NM_001270551Re-query CCDS DB by Protein ID:NP_001257480Link to BLAST:NP_001257480.1
Original member Current member NCBI NM_002391.6 NP_002382.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002391.6Link to Protein Sequence:NP_002382.1Re-query CCDS DB by Nucleotide ID:NM_002391Re-query CCDS DB by Protein ID:NP_002382Link to BLAST:NP_002382.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012333.1 143 P21741-1 143 100% 0 0
NP_001012334.1 143 P21741-1 143 100% 0 0
NP_001257479.1 143 P21741-1 143 100% 0 0
NP_001257480.1 143 P21741-1 143 100% 0 0
NP_002382.1 143 P21741-1 143 100% 0 0

Chromosomal Locations for CCDS 7919.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 46382058 46382133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 46382294 46382461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 46382587 46382748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 46383469 46383494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (432 nt):
ATGCAGCACCGAGGCTTCCTCCTCCTCACCCTCCTCGCCCTGCTGGCGCTCACCTCCGCGGTCGCCAAAA
AGAAAGATAAGGTGAAGAAGGGCGGCCCGGGGAGCGAGTGCGCTGAGTGGGCCTGGGGGCCCTGCACCCC
CAGCAGCAAGGATTGCGGCGTGGGTTTCCGCGAGGGCACCTGCGGGGCCCAGACCCAGCGCATCCGGTGC
AGGGTGCCCTGCAACTGGAAGAAGGAGTTTGGAGCCGACTGCAAGTACAAGTTTGAGAACTGGGGTGCGT
GTGATGGGGGCACAGGCACCAAAGTCCGCCAAGGCACCCTGAAGAAGGCGCGCTACAATGCTCAGTGCCA
GGAGACCATCCGCGTCACCAAGCCCTGCACCCCCAAGACCAAAGCAAAGGCCAAAGCCAAGAAAGGGAAG
GGAAAGGACTAG

Translation (143 aa):
MQHRGFLLLTLLALLALTSAVAKKKDKVKKGGPGSECAEWAWGPCTPSSKDCGVGFREGTCGAQTQRIRC
RVPCNWKKEFGADCKYKFENWGACDGGTGTKVRQGTLKKARYNAQCQETIRVTKPCTPKTKAKAKAKKGK
GKD


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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