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Report for CCDS46413.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46413.1 Public Homo sapiens 2 PLEKHB2 24 110 108 CCDS HistoryNCBI Gene:55041Re-query CCDS DB by CCDS ID:46413.1Re-query CCDS DB by GeneID:55041See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46413.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409612.5 ENSP00000386662.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409612.5Link to Ensembl Protein Viewer:ENSP00000386662.1Re-query CCDS DB by Nucleotide ID:ENST00000409612Re-query CCDS DB by Protein ID:ENSP00000386662
Original member Current member EBI ENST00000409279.1 ENSP00000386666.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409279.1Link to Ensembl Protein Viewer:ENSP00000386666.1Re-query CCDS DB by Nucleotide ID:ENST00000409279Re-query CCDS DB by Protein ID:ENSP00000386666
Original member Current member EBI ENST00000693505.1 ENSP00000510611.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000693505.1Link to Ensembl Protein Viewer:ENSP00000510611.1Re-query CCDS DB by Nucleotide ID:ENST00000693505Re-query CCDS DB by Protein ID:ENSP00000510611
Original member Current member NCBI NM_001100623.2 NP_001094093.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001100623.2Link to Protein Sequence:NP_001094093.1Re-query CCDS DB by Nucleotide ID:NM_001100623Re-query CCDS DB by Protein ID:NP_001094093Link to BLAST:NP_001094093.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001094093.1 222 Q96CS7-1 222 100% 0 0

Chromosomal Locations for CCDS 46413.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 131120942 131120978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131125753 131125905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131126684 131126786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131130721 131130760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131132902 131132991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131140167 131140275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131146637 131146773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (669 nt):
ATGGCGTTTGTGAAGAGTGGCTGGTTGCTGCGACAGAGTACTATTTTGAAGCGCTGGAAGAAGAACTGGT
TTGATCTGTGGTCGGATGGTCACCTGATCTATTATGATGACCAGACTCGGCAGAATATCGAGGATAAGGT
CCACATGCCAATGGACTGCATCAACATCCGCACGGGGCAGGAATGTCGGGATACTCAGCCCCCGGATGGA
AAGTCAAAAGACTGCATGCTCCAGATTGTTTGTCGAGATGGGAAAACAATTAGTCTTTGTGCAGAAAGCA
CAGATGATTGCTTGGCCTGGAAATTTACACTCCAAGATTCTAGGACAAACACAGCGTATGTGGGCTCTGC
AGTCATGACCGATGAGACATCCGTGGTTTCCTCACCTCCACCATACACGGCCTATGCTGCACCGGCCCCT
GAGCAGGCTTATGGCTATGGGCCATACGGTGGTGCGTACCCGCCAGGAACTCAAGTTGTCTACGCTGCGA
ATGGGCAGGCGTATGCCGTGCCCTACCAGTACCCATATGCAGGACTTTATGGACAGCAGCCTGCTAACCA
AGTCATCATTCGAGAGCGCTATCGAGACAACGACAGCGACCTGGCACTGGGCATGCTGGCAGGAGCAGCC
ACGGGCATGGCCTTAGGGTCTCTATTTTGGGTCTTCTAG

Translation (222 aa):
MAFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDG
KSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSRTNTAYVGSAVMTDETSVVSSPPPYTAYAAPAP
EQAYGYGPYGGAYPPGTQVVYAANGQAYAVPYQYPYAGLYGQQPANQVIIRERYRDNDSDLALGMLAGAA
TGMALGSLFWVF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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