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Report for CCDS21951.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21951.1 Public Mus musculus 7 Dpysl4 23 108 98 CCDS HistoryNCBI Gene:26757Re-query CCDS DB by CCDS ID:21951.1Re-query CCDS DB by GeneID:26757See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21951.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026551.14 ENSMUSP00000026551.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026551.14Link to Ensembl Protein Viewer:ENSMUSP00000026551.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000026551Re-query CCDS DB by Protein ID:ENSMUSP00000026551
Original member Current member NCBI NM_011993.4 NP_036123.3 Accepted alive Link to Nucleotide Sequence:NM_011993.4Link to Protein Sequence:NP_036123.3Re-query CCDS DB by Nucleotide ID:NM_011993Re-query CCDS DB by Protein ID:NP_036123Link to BLAST:NP_036123.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036123.3 572 O35098-1 572 99.8252% 0 1

Chromosomal Locations for CCDS 21951.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 139086123 139086161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139089510 139089598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139090159 139090343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139091862 139092026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139093606 139093667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139093761 139093841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139094394 139094462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139094857 139094977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139096168 139096324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139096667 139096808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139097822 139097992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139098470 139098649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139099740 139099905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139100902 139100993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1719 nt):
ATGTCCTTCCAAGGCAAGAAGAGCATTCCCCGGATAACGAGCGACCGCCTTCTCATCAAAGGTGGGAAGA
TTGTGAACGATGACCAGTCCTTTCATGCTGATCTGTATGTGGAAGACGGTCTGATTAAACAAATTGGAGA
AAATCTCATCGTCCCTGGGGGCATCAAAACCATCGATGCTCATGGCCTGATGGTGCTGCCTGGGGGAGTT
GACGTTCACACCCGGCTGCAGATGCCTGTGATGGGCATGACCCCAGCTGATGATTTCTGTCAGGGCACCA
AGGCGGCTCTAGCAGGCGGGACCACCATGATATTGGACCATGTGTTTCCTGACGCTGGTGTGAGCCTGCT
GGCAGCCTATGAGCAGTGGCGGGAGCGAGCAGACAGCGCGGCCTGCTGTGACTACTCCTTACATGTGGAC
ATTCCTCGCTGGCACGAGAGCACCAAAGAAGAGCTGGAGGCCCTAGTCAGGGACAAAGGTGTGAACTCCT
TCCTGGTCTTCATGGCATACAAGGACAGGTGCCAGTGTACTGACGGTCAGATATATGAAATCTTCAGCCT
CATCCGGGACCTGGGAGCTGTGGCCCAGGTGCACGCAGAAAATGGGGACATCGTGGAGGAGGAACAGAAG
CGCCTGCTGGAGCAAGGCATCACTGGTCCTGAGGGCCATGTGCTCAGCCACCCAGAAGAGGTAGAGGCCG
AGGCTGTGTACAGAGCAGTCACCATTGCCAAGCAGGCCAACTGCCCACTATACGTCACCAAGGTGATGAG
CAAGGGTGCAGCTGACATGGTTGCCCAAGCCAAGCGCAGGGGGGTGGTCGTCTTTGGGGAACCTATCACT
GCCAGCCTGGGCACTGATGGCTCACACTACTGGAGCAAGAACTGGGCCAAGGCTGCAGCCTTTGTCACTT
CACCCCCTATCAACCCGGACCCTACTACTGCAGACCACCTCACCTCTCTGCTGTCCAGTGGGGACCTCCA
GGTGACAGGCAGTGCCCACTGCACCTTCACTACTGCCCAGAAGGCTGTTGGCAAAGACAACTTCACACTG
ATCCCCGAGGGAGTCAACGGTATAGAAGAGCGCATGTCTGTGGTCTGGGAGAAATGTGTGGCTTCAGGGA
AAATGGACGAGAATGAGTTCGTTGCCGTGACCAGCACAAATGCTGCCAAAATCTTCAATTTTTACCCCAG
GAAGGGGCGTGTGGCCGTGGGCTCTGATGCTGACCTGGTCATCTGGAACCCCAGGGCCACGAAAGTCATC
TCTGCCAAGAGCCATAACCTGAATGTAGAGTACAACATCTTTGAAGGAGTGGAGTGCCGAGGAGTGCCCA
CGGTGGTCATAAGTCAGGGCAGAGTGGTGCTGGAGGACGGAAACCTGCTTGTCACTCCAGGGGCTGGCCG
CTTCATTCCCCGGAAGACGTTCCCGGACTTTGTCTATAAGAGGATAAAGGCTCGCAACAGGCTAGCAGAG
ATCCACGGTGTGCCTCGAGGCCTGTACGACGGGCCTGTGCATGAAGTGATGTTACCTGCCAAGCCAGGAA
GTGGCACACAGGCCCGTGCATCCTGTTCAGGCAAGATCTCAGTGCCACCCGTGCGCAACCTGCACCAGTC
GGGGTTCAGCCTATCTGGCTCTCAGGCTGACGATCACATTGCCAGACGTACGGCTCAGAAGATCATGGCA
CCCCCCGGAGGACGCTCCAACATCACGTCTCTTTCCTAG

Translation (572 aa):
MSFQGKKSIPRITSDRLLIKGGKIVNDDQSFHADLYVEDGLIKQIGENLIVPGGIKTIDAHGLMVLPGGV
DVHTRLQMPVMGMTPADDFCQGTKAALAGGTTMILDHVFPDAGVSLLAAYEQWRERADSAACCDYSLHVD
IPRWHESTKEELEALVRDKGVNSFLVFMAYKDRCQCTDGQIYEIFSLIRDLGAVAQVHAENGDIVEEEQK
RLLEQGITGPEGHVLSHPEEVEAEAVYRAVTIAKQANCPLYVTKVMSKGAADMVAQAKRRGVVVFGEPIT
ASLGTDGSHYWSKNWAKAAAFVTSPPINPDPTTADHLTSLLSSGDLQVTGSAHCTFTTAQKAVGKDNFTL
IPEGVNGIEERMSVVWEKCVASGKMDENEFVAVTSTNAAKIFNFYPRKGRVAVGSDADLVIWNPRATKVI
SAKSHNLNVEYNIFEGVECRGVPTVVISQGRVVLEDGNLLVTPGAGRFIPRKTFPDFVYKRIKARNRLAE
IHGVPRGLYDGPVHEVMLPAKPGSGTQARASCSGKISVPPVRNLHQSGFSLSGSQADDHIARRTAQKIMA
PPGGRSNITSLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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