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Report for CCDS1915.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1915.1 Public Homo sapiens 2 MCEE 24 110 108 CCDS HistoryNCBI Gene:84693Re-query CCDS DB by CCDS ID:1915.1Re-query CCDS DB by GeneID:84693See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1915.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000244217.6 ENSP00000244217.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000244217.6Link to Ensembl Protein Viewer:ENSP00000244217.5Re-query CCDS DB by Nucleotide ID:ENST00000244217Re-query CCDS DB by Protein ID:ENSP00000244217
Original member Current member NCBI NM_032601.4 NP_115990.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032601.4Link to Protein Sequence:NP_115990.3Re-query CCDS DB by Nucleotide ID:NM_032601Re-query CCDS DB by Protein ID:NP_115990Link to BLAST:NP_115990.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115990.3 176 Q96PE7 176 100% 0 0

Chromosomal Locations for CCDS 1915.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 71109970 71110122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71124206 71124543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 71130180 71130219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGGCGCGGGTGCTGAAGGCTGCAGCCGCGAATGCCGTAGGGCTTTTTTCCAGACTTCAAGCTCCCATTC
CAACAGTAAGAGCTTCTTCCACATCACAGCCCTTGGATCAAGTGACAGGTTCTGTGTGGAACCTGGGTCG
ACTCAACCATGTAGCCATAGCAGTGCCAGATTTGGAAAAGGCTGCAGCATTTTATAAGAATATTCTGGGG
GCCCAGGTAAGTGAAGCGGTCCCTCTTCCTGAACATGGAGTATCTGTTGTTTTTGTCAACCTGGGAAATA
CCAAGATGGAACTGCTTCATCCATTGGGACGTGACAGTCCAATTGCAGGTTTTCTGCAGAAAAACAAGGC
TGGAGGAATGCATCACATCTGCATCGAGGTGGATAATATTAATGCAGCTGTGATGGATTTGAAAAAAAAG
AAGATCCGCAGTCTAAGTGAAGAGGTCAAAATAGGAGCACATGGAAAACCAGTGATTTTTCTCCATCCTA
AAGACTGTGGTGGAGTCCTTGTGGAACTGGAGCAAGCTTGA

Translation (176 aa):
MARVLKAAAANAVGLFSRLQAPIPTVRASSTSQPLDQVTGSVWNLGRLNHVAIAVPDLEKAAAFYKNILG
AQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGRDSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKK
KIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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