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Report for CCDS10244.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10244.1 Public Homo sapiens 15 ARIH1 24 110 108 CCDS HistoryNCBI Gene:25820Re-query CCDS DB by CCDS ID:10244.1Re-query CCDS DB by GeneID:25820See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10244.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379887.9 ENSP00000369217.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000379887.9Link to Ensembl Protein Viewer:ENSP00000369217.4Re-query CCDS DB by Nucleotide ID:ENST00000379887Re-query CCDS DB by Protein ID:ENSP00000369217
Original member Current member NCBI NM_005744.5 NP_005735.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005744.5Link to Protein Sequence:NP_005735.2Re-query CCDS DB by Nucleotide ID:NM_005744Re-query CCDS DB by Protein ID:NP_005735Link to BLAST:NP_005735.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005735.2 557 Q9Y4X5 557 100% 0 0

Chromosomal Locations for CCDS 10244.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 72474640 72475014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72518067 72518134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72544820 72544964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72555271 72555363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72555852 72555907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72561483 72561549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72563394 72563500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72566563 72566605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72567106 72567177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72570177 72570307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72572108 72572165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72580731 72580991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72582075 72582187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 72583208 72583292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1674 nt):
ATGGACTCGGACGAGGGCTACAACTACGAGTTCGACGAGGACGAGGAGTGCAGTGAGGAGGACAGCGGCG
CCGAGGAGGAGGAGGACGAAGACGACGACGAGCCGGACGATGATACCCTGGATCTGGGCGAGGTGGAGCT
GGTGGAGCCCGGGCTGGGCGTCGGCGGGGAGCGGGACGGACTGCTGTGCGGGGAGACGGGCGGTGGCGGC
GGCAGCGCTCTGGGGCCCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGTGGTGGTGGCGGGCCGGGGCATG
AGCAGGAGGAGGATTACCGCTACGAGGTGCTCACGGCCGAGCAGATTCTACAACACATGGTGGAATGTAT
CCGGGAGGTCAACGAGGTCATCCAGAATCCAGCAACTATCACAAGAATACTCCTTAGCCACTTCAATTGG
GATAAAGAGAAGCTAATGGAAAGGTACTTTGATGGAAACCTGGAGAAGCTCTTTGCTGAGTGTCATGTAA
TTAATCCAAGTAAAAAGTCTCGAACACGCCAGATGAATACAAGGTCATCAGCACAGGATATGCCTTGTCA
GATCTGCTACTTGAACTACCCTAACTCGTATTTCACTGGCCTTGAATGTGGACATAAGTTTTGTATGCAG
TGCTGGAGTGAATATTTAACTACCAAAATAATGGAAGAAGGCATGGGTCAGACTATTTCGTGTCCTGCTC
ATGGTTGTGATATCTTAGTGGATGACAACACAGTTATGCGCCTGATCACAGATTCAAAAGTTAAATTAAA
GTATCAGCATTTAATAACAAATAGCTTTGTAGAGTGCAATCGACTGTTAAAGTGGTGTCCTGCCCCAGAT
TGCCACCATGTTGTTAAAGTCCAATATCCTGATGCTAAACCTGTTCGCTGCAAATGTGGGCGCCAATTTT
GCTTTAACTGTGGAGAAAATTGGCATGATCCTGTTAAATGTAAGTGGTTAAAGAAATGGATTAAAAAGTG
TGATGATGACAGTGAAACCTCCAATTGGATTGCAGCCAACACAAAGGAATGTCCCAAATGCCATGTCACA
ATTGAGAAGGATGGTGGTTGTAATCACATGGTCTGTCGTAACCAGAATTGTAAAGCAGAGTTTTGCTGGG
TGTGTCTTGGCCCATGGGAACCACATGGATCTGCCTGGTACAACTGTAACCGCTATAATGAGGATGATGC
AAAGGCAGCAAGAGATGCACAGGAGCGATCTAGGGCAGCCCTGCAGAGGTACCTGTTCTACTGTAATCGC
TATATGAACCACATGCAGAGCCTGCGCTTTGAGCACAAACTATATGCTCAGGTGAAACAGAAAATGGAGG
AGATGCAGCAGCACAACATGTCCTGGATTGAGGTGCAGTTCCTGAAGAAGGCAGTTGATGTCCTCTGCCA
GTGTCGTGCCACACTCATGTACACTTATGTCTTCGCTTTCTACCTCAAAAAGAATAACCAGTCCATTATC
TTTGAGAATAACCAAGCAGATCTAGAGAATGCCACAGAGGTGCTCTCGGGCTACCTTGAACGAGATATTT
CCCAAGATTCTCTGCAGGATATAAAGCAGAAAGTACAAGACAAGTACAGATACTGTGAGAGTCGACGAAG
GGTTTTGTTACAGCATGTGCATGAAGGCTATGAAAAAGATCTGTGGGAGTACATTGAGGACTGA

Translation (557 aa):
MDSDEGYNYEFDEDEECSEEDSGAEEEEDEDDDEPDDDTLDLGEVELVEPGLGVGGERDGLLCGETGGGG
GSALGPGGGGGGGGGGGGGGPGHEQEEDYRYEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNW
DKEKLMERYFDGNLEKLFAECHVINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGLECGHKFCMQ
CWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPD
CHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVT
IEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNR
YMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLKKNNQSII
FENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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