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Report for CCDS32338.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32338.1 Public Homo sapiens 15 MCTP2 24 110 108 CCDS HistoryNCBI Gene:55784Re-query CCDS DB by CCDS ID:32338.1Re-query CCDS DB by GeneID:55784See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32338.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357742.10 ENSP00000350377.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357742.10Link to Ensembl Protein Viewer:ENSP00000350377.4Re-query CCDS DB by Nucleotide ID:ENST00000357742Re-query CCDS DB by Protein ID:ENSP00000350377
Original member Current member NCBI NM_001385001.1 NP_001371930.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001385001.1Link to Protein Sequence:NP_001371930.1Re-query CCDS DB by Nucleotide ID:NM_001385001Re-query CCDS DB by Protein ID:NP_001371930Link to BLAST:NP_001371930.1
Original member Current member NCBI NM_001385002.1 NP_001371931.1 Accepted alive Link to Nucleotide Sequence:NM_001385002.1Link to Protein Sequence:NP_001371931.1Re-query CCDS DB by Nucleotide ID:NM_001385002Re-query CCDS DB by Protein ID:NP_001371931Link to BLAST:NP_001371931.1
Original member Current member NCBI NM_001385003.1 NP_001371932.1 Accepted alive Link to Nucleotide Sequence:NM_001385003.1Link to Protein Sequence:NP_001371932.1Re-query CCDS DB by Nucleotide ID:NM_001385003Re-query CCDS DB by Protein ID:NP_001371932Link to BLAST:NP_001371932.1
Original member Current member NCBI NM_018349.4 NP_060819.3 Accepted alive Link to Nucleotide Sequence:NM_018349.4Link to Protein Sequence:NP_060819.3Re-query CCDS DB by Nucleotide ID:NM_018349Re-query CCDS DB by Protein ID:NP_060819Link to BLAST:NP_060819.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001371930.1 878 Q6DN12-1 878 100% 0 0
NP_001371931.1 878 Q6DN12-1 878 100% 0 0
NP_001371932.1 878 Q6DN12-1 878 100% 0 0
NP_060819.3 878 Q6DN12-1 878 100% 0 0

Chromosomal Locations for CCDS 32338.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 94298266 94298730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94314282 94314344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94315529 94315637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94339290 94339432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94340199 94340275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94340813 94340924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94345129 94345164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94356137 94356301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94358482 94358612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94367605 94367791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94370087 94370180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94384022 94384124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94385423 94385525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94398961 94399062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94399921 94399995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94401900 94402019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94440176 94440298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94442919 94442960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94458137 94458246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94470333 94470442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94476696 94476793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94478966 94479034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2637 nt):
ATGGATCTGGATAAACCATCTGTTTGGGGCTCATTAAAACAGCGGACCAGGCCATTGTTGATCAACTTGA
GCAAGAAGAAGGTGAAAAAGAACCCAAGTAAGCCCCCAGATCTACGGGCAAGGCATCACTTGGACCGCCG
TCTCAGCCTCTCTGTGCCTGATCTCCTGGAGGCTGAGGCCTTGGCCCCAGAGGGCCGGCCTTACTCCGGG
CCACAGTCTTCCTACACCTCGGTGCCCAGCAGTCTGTCCACTGCAGGGATCTTTCCCAAGAGCAGCAGTA
GCTCCTTGAAACAGTCTGAAGAAGAATTGGATTGGAGCCAGGAAGAAGCCAGTCACCTCCATGTGGTGGA
AACAGACTCAGAGGAGGCCTATGCCTCTCCTGCTGAGCGGAGACGGGTGTCCAGCAACGGCATCTTTGAT
CTTCAGAAAACTTCCCTTGGAGGGGATGCACCAGAAGAGCCAGAGAAGCTATGTGGAAGCAGTGACCTGA
ATGCTTCTATGACATCTCAACATTTTGAAGAACAATCTGTACCGGGGGAAGCCAGTGATGGCTTGAGTAA
CCTCCCCAGCCCTTTTGCGTACCTCCTCACCATACACCTGAAGGAAGGCCGGAACCTGGTTGTCCGAGAT
CGCTGTGGCACAAGTGATCCTTATGTGAAATTTAAGCTGAATGGGAAGACGCTGTACAAAAGTAAAGTCA
TATATAAGAACTTGAACCCAGTATGGGATGAGATAGTTGTATTGCCAATCCAAAGCCTTGATCAAAAGCT
ACGTGTGAAGGTATATGATCGAGATTTAACCACATCTGATTTCATGGGTTCTGCATTTGTCATTCTCAGT
GATCTTGAGCTTAACAGAACAACTGAACATATTTTAAAACTGGAAGATCCAAACAGTTTAGAAGATGACA
TGGGAGTGATCGTGTTAAATTTGAACCTAGTGGTAAAACAGGGTGATTTCAAGAGACACCGTTGGTCAAA
TCGGAAGCGATTAAGTGCCAGCAAGTCCTCTTTGATACGCAACCTACGGCTCTCTGAGTCCTTGAAAAAG
AACCAACTCTGGAACGGGATTATAAGTATAACTTTGTTGGAAGGGAAGAATGTCTCAGGAGGAAGCATGA
CAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATAAAAGTAAGACACTGTGTAAGAGTGCAAA
TCCGCAGTGGCAGGAACAGTTTGACTTTCACTACTTCTCTGACAGGATGGGCATTTTGGACATTGAAGTG
TGGGGAAAGGACAACAAAAAGCATGAGGAACGTCTGGGCACGTGTAAAGTGGATATCTCGGCACTCCCTC
TGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGGGGCTCTCCTTATGTTGGTCACACT
TACACCCTGTGCGGGGGTCTCCGTCTCTGATCTGTGTGTCTGCCCCTTAGCAGACCTCAGCGAAAGAAAG
CAGATTACCCAGCGATATTGCTTACAGAACTCCCTGAAAGATGTGAAAGACGTCGGCATTCTACAAGTGA
AGGTTTTAAAGGCAGCAGATCTCTTAGCGGCAGATTTCTCAGGGAAGAGTGACCCATTTTGCTTGTTGGA
GTTAGGCAATGACCGACTTCAGACGCATACCGTCTACAAAAACCTCAACCCTGAATGGAACAAAGTTTTT
ACATTTCCCATTAAAGATATCCATGATGTTTTGGAAGTGACAGTGTTTGATGAAGATGGAGATAAACCCC
CAGATTTTCTTGGAAAAGTTGCCATTCCCTTGCTGTCCATTAGAGATGGACAACCGAATTGTTATGTACT
AAAGAATAAAGATTTAGAACAAGCTTTTAAAGGAGTTATTTACTTAGAGATGGACCTTATATATAATCCG
GTGAAAGCAAGTATTAGGACTTTTACTCCCCGGGAAAAGCGCTTTGTTGAAGACAGCCGCAAGCTGTCCA
AAAAGATCTTATCAAGAGATGTGGACCGTGTGAAAAGAATCACTATGGCAATATGGAATACAATGCAGTT
CCTTAAAAGCTGCTTCCAGTGGGAATCCACATTAAGAAGTACAATAGCATTCGCGGTATTTTTGATCACT
GTCTGGAATTTTGAACTATATATGATCCCCTTGGCATTGTTGCTGATCTTTGTCTACAATTTCATCAGAC
CTGTGAAAGGCAAGGTCAGCAGCATCCAGGACAGCCAGGAGAGCACAGACATAGATGACGAGGAGGATGA
AGATGACAAGGAATCTGAGAAAAAGGGGTTGATTGAAAGAATCTATATGGTACAGGATATTGTTTCAACT
GTTCAAAACGTCTTGGAGGAAATAGCTTCTTTTGGAGAAAGGATTAAGAACACATTTAACTGGACGGTCC
CCTTCCTTTCATCTCTGGCCTGTTTGATTCTGGCAGCAGCCACCATCATTTTGTATTTCATTCCACTGCG
GTACATCATTTTAATCTGGGGCATAAATAAATTTACTAAGAAGCTTCGAAATCCCTATTCCATCGACAAT
AATGAGCTACTAGACTTCCTCTCTAGGGTACCGTCTGATGTTCAAAAGGTGCAGTATGCAGAATTGAAAC
TCTGCAGCAGCCACAGCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAG

Translation (878 aa):
MDLDKPSVWGSLKQRTRPLLINLSKKKVKKNPSKPPDLRARHHLDRRLSLSVPDLLEAEALAPEGRPYSG
PQSSYTSVPSSLSTAGIFPKSSSSSLKQSEEELDWSQEEASHLHVVETDSEEAYASPAERRRVSSNGIFD
LQKTSLGGDAPEEPEKLCGSSDLNASMTSQHFEEQSVPGEASDGLSNLPSPFAYLLTIHLKEGRNLVVRD
RCGTSDPYVKFKLNGKTLYKSKVIYKNLNPVWDEIVVLPIQSLDQKLRVKVYDRDLTTSDFMGSAFVILS
DLELNRTTEHILKLEDPNSLEDDMGVIVLNLNLVVKQGDFKRHRWSNRKRLSASKSSLIRNLRLSESLKK
NQLWNGIISITLLEGKNVSGGSMTEMFVQLKLGDQRYKSKTLCKSANPQWQEQFDFHYFSDRMGILDIEV
WGKDNKKHEERLGTCKVDISALPLKQANCLELPLDSCLGALLMLVTLTPCAGVSVSDLCVCPLADLSERK
QITQRYCLQNSLKDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVF
TFPIKDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLIYNP
VKASIRTFTPREKRFVEDSRKLSKKILSRDVDRVKRITMAIWNTMQFLKSCFQWESTLRSTIAFAVFLIT
VWNFELYMIPLALLLIFVYNFIRPVKGKVSSIQDSQESTDIDDEEDEDDKESEKKGLIERIYMVQDIVST
VQNVLEEIASFGERIKNTFNWTVPFLSSLACLILAAATIILYFIPLRYIILIWGINKFTKKLRNPYSIDN
NELLDFLSRVPSDVQKVQYAELKLCSSHSPLRKKRSAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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