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Report for CCDS92801.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92801.1 Public Homo sapiens 2 THNSL2 24 110 108 CCDS HistoryNCBI Gene:55258Re-query CCDS DB by CCDS ID:92801.1Re-query CCDS DB by GeneID:55258See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92801.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000496844.6 ENSP00000501447.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000496844.6Link to Ensembl Protein Viewer:ENSP00000501447.1Re-query CCDS DB by Nucleotide ID:ENST00000496844Re-query CCDS DB by Protein ID:ENSP00000501447
Original member Current member NCBI NM_001384383.1 NP_001371312.1 Accepted alive Link to Nucleotide Sequence:NM_001384383.1Link to Protein Sequence:NP_001371312.1Re-query CCDS DB by Nucleotide ID:NM_001384383Re-query CCDS DB by Protein ID:NP_001371312Link to BLAST:NP_001371312.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001371312.1 384 Q86YJ6-3 384 100% 0 0

Chromosomal Locations for CCDS 92801.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 88173151 88173373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 88174639 88174833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 88175249 88175401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 88178783 88179013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 88182699 88182847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 88182948 88183073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 88185898 88185975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1155 nt):
ATGTGGTATGTCAGCACCAGGGGCGTAGCCCCACGGGTCAACTTTGAGGGGGCCCTCTTCTCTGGCTATG
CACCTGACGGGGGCCTCTTTATGCCTGAAGAGCTCCCACAGTTGGACAGAGGGACCCTGTGCCAGTGGAG
CACACTCTCCTATCCTGGCCTGGTGAAGGAGCTGTGTGCCCTCTTCATTGGCTCTGAGCTCCTTCCAAAA
GATGAATTAAATGATCTGATCGACCGAGCCTTCAGCAGATTCCGTCACAGAGAAGTGGTCCATCTGTCCA
GGTTGAGGAATGGGCTGAACGTGTTGGAGCTGTGGCATGGCGTCACATATGCATTTAAGGACCTGTCCCT
GTCCTGCACAACACAGTTCCTGCAGTACTTCCTGGAGAAGAGGGAGAAGCACGTCACTGTGGTTGTAGGA
ACATCTGGGGACACAGGAAGTGCTGCCATTGAGAGTGTTCAAGGGGCAAAGAACATGGACATTATCGTTC
TGCTGCCCAAAGGTCACTGCACAAAGATTCAGGAGCTCCAGATGACAACGGTGCTGAAGCAGAACGTACA
TGTGTTTGGAGTGGAGGGAAACAGCGATGAGCTCGATGAGCCGATCAAGACTGTGTTTGCCGATGTGGCT
TTTGTCAAGAAGCACAATCTGATGAGCCTGAATTCGATCAACTGGTCCCGGGTCCTGGTGCAGATGGCCC
ATCACTTCTTTGCTTACTTCCAGTGTACGCCATCCTTGGACACACATCCCCTACCCCTGGTGGAGGTGGT
TGTGCCAACAGGGGCTGCCGGTAACCTTGCAGCTGGGTACATTGCTCAAAAGATAGGCCTGCCCATCCGT
CTGGTCGTGGCAGTGAACCGCAATGACATCATCCACAGGACTGTCCAGCAGGGAGACTTCTCTCTCTCTG
AGGCTGTTAAATCAACCTTGGCATCAGCTATGGACATTCAGGTGCCCTACAACATGGAGAGGGTGTTCTG
GCTGCTCTCTGGCTCTGACAGCCAGGTGACAAGAGCCCTCATGGAGCAGTTTGAAAGGACCCAAAGTGTG
AATCTGCCCAAGGAACTGCACAGCAAGCACTCCCCGGTGCTGCCTCGCCCCTGCCTCTGCAGCCAAGTTC
CCGGAAGCTGTCCTGGCTGCTGGCCTGACCCCTGA

Translation (384 aa):
MWYVSTRGVAPRVNFEGALFSGYAPDGGLFMPEELPQLDRGTLCQWSTLSYPGLVKELCALFIGSELLPK
DELNDLIDRAFSRFRHREVVHLSRLRNGLNVLELWHGVTYAFKDLSLSCTTQFLQYFLEKREKHVTVVVG
TSGDTGSAAIESVQGAKNMDIIVLLPKGHCTKIQELQMTTVLKQNVHVFGVEGNSDELDEPIKTVFADVA
FVKKHNLMSLNSINWSRVLVQMAHHFFAYFQCTPSLDTHPLPLVEVVVPTGAAGNLAAGYIAQKIGLPIR
LVVAVNRNDIIHRTVQQGDFSLSEAVKSTLASAMDIQVPYNMERVFWLLSGSDSQVTRALMEQFERTQSV
NLPKELHSKHSPVLPRPCLCSQVPGSCPGCWPDP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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