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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS29888.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
29888.1 |
Public |
Mus musculus |
19 |
Pdcd11 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 29888.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000072141.3 |
ENSMUSP00000072008.2 |
Accepted |
alive |
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NCBI |
NM_011053.2 |
NP_035183.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_035183.2 |
1862 |
Q6NS46 |
1862 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 29888.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5589 nt): ATGGCAAACCTGGAGGAAAGCTTCCCCCGAGGGGGGACACGGAAACTCCACAAATCAGAGAAGTCTTCCC AGCAGGTGGTTGAACAAGACAACTTATTTGATGTTTCCACAGAAGAAGGTCCCATTAAAAGGAAAAAGAG CCAGAAAGGGCCAGCAAAAACAAAAAAATTGAAAATTGAAAAGAGAAAATCCATCAAATCTATAAAAGAG AAGTTTGAAATTCTTAGTCTTGAGTCCCTATGTGAGGGGATGCGGATTTTGGGCTGTGTGAAGGAGGTGA GTGAGCTGGAGCTGGTGGTCAGCCTTCCCAACGGCCTCCAAGGGTTTGTGCAAGTGACCGAAGTCTGTGA CGCCTACACTCAGAAGCTGAATGAGCAGGTGGCACAAGAAGAACCTCTGGAGGACCTGCTCCGCCTGCCT GAGCTCTTCTCCCCTGGAATGTTGGTGAGGTGTGTGGTGAGCAGCCTGGATGTCACAGAGAGTGGCAAGA AGAGCGTCAAGCTTTCTGTGAACCCCAAACGTGTCAACAAAGTGCTGAGTGCTGATGCCCTGAGGCCTGG CATGCTGCTGACAGGCACAGTGTCAAGCCTGGAAGACCATGGCTACCTAGTGGACATTGGCGTTGGTGGG ACCAGAGCTTTTCTGTCACTTAAGAAGGCACAAGAGTACATCCGGCAGAAGAACAAAGGTGCTAAGTTCA AAGTCGGCCAGTACCTGACCTGTGTGGTTGAAGAGGTGAAAAGCAACGGAGGAGTTGTGAGTCTCTCTGT AGAGCACTCCGAGGTTTCCTCTGCCTTCGCAACTGAGGAGCAAAGCTGGAACCTGAATAACTTACTACCA GGGCTGCTGGTCAAAGCCCAGGTGCAGAAGGTAACTCAGTTTGGACTCCAGCTAAATTTCCTTACGTTCT TCAAGGGCCTGGTTGACTTCATGCATCTGGAGCCCAAGAAAATGGGATCTTATTCTTCAAATCAAACGGT AAAAGCCTGCATCCTCTGCGTCCATCCTCGCACCAGAGTTGTGCGACTGAGCCTGCGCCCCATCTTCCTG CATCCTGGGCGTCCACTCACCCGCATCTCTTACCAGCAGCTAGGGGCTGTGCTAGATGATGTCCCTGTTC AGGGTTTTTTTAAGAATGCGGGGGCCATCTTCAGGCTGAAGGATGGGGTACTGGCCTACGCCCGGGTCAG CCATCTCTCTGATTCTAAGAAAGCATTCAACGCTGAGGCCTTCAAACCGGGGAGCACTCACAAGTGTAGA ATCATTGACTACAGCCAGATGGATGAGCTGGCCTTGCTCTCTCTGCGGAAATCAATTATTGCAGCTCCAT TCCTTAGATATCATGACATCAAAATAGGGACAGTAGTAAAGGGCACAGTGCTGGCCATAAAGCCATTTGG GATCCTGGTGAAGGTGGGTGAGCAGATAAAAGGCCTGGTGCCCTCCATGCACCTGGCTGACATCATGATG AAGAACCCAGAGAAGAAGTACAGCCCAGGGGATGAGGTCAAGTGCAGGGTTTTGCTCTGTGACCCTGAAG CCAAGAAGCTAATTATGACCCTGAAAAAAACCCTTGTCACATCCAAACTGTCTCTCATCACCTGCTATGA GGGTGCCAAGCCTGGCCTGCAGACGCACGGTGTTATCATACGGGTCAAGGACTATGGCTGCATTGTGAAG TTCTACAACGATGTGCAGGGGCTAGTGCCTAAGCATGAGCTTAGCACCCAGCACATCCCGGACCCAGAGA CGGTCTTTTACACTGGCCAGGTGGTAAAGGTGGCAGTGCTGAGCTGTGAGCCTTCCAAGGAGAGGATGCT CCTGTCCTTCAGACTGTTGAGTGACTCGCGGCCAAAGGATCCGGGTGTTGAGAGCAGTCAGAAGAAAACA GGAGCTGTGCGCATCGGGCAGTTGGTGGATGTGAAGGTCCTGGAGAAGACCAAAACCGGGCTGGAGGTGG CCATCCTGCCCCATAACACCCCTGCTTTCCTCCCCACGCCACACCTGTCCGACCACGCTGCCAATGGCCC ACTGTTGCACCACTGGCTCCAGACAGGTGACACCCTTCACCGAGTTCTGTGTTTGAGCCAGAGTGAGAGA CACATTCTTCTTTGCAGGAAACCAGCTTTGGTCTCCACAGTAGAAGGTGGCCAGGACCCCAAGAGCCTCT CAGAAATCCAGCCCGGAATGTTGCTCATTGGTTTTGTGAAGTGCATCAAGGAGTATGGCGTGTTCGTCCA GTTCCCCTCAGGTCTCAGTGGACTGTCCCCCAAAACTATCATGAGTGACAAGTTCGTAACCACTCCAAGT GAACACTTTGTGGAGGGTCAGACAGTCGTTGCTAAGGTGACCAATGTGGATGAATCGAAGCAGAGGATGC TGCTGTCTCTGCGGCTGTCAGACTGCAGTCTGGGGGATTCGGCCAGCACCAGCTTCCTCCTCCTGTGCCA GTGCCTGGAAGAGCTGCAGGGCATTCGCAGCCTCATGAGCAACCAAGACTCTGTATTGATCCAGACACTT GCTGACATGACCCCGGGGATGGTCCTTGATGCCGTGGTCCATGAGGTGTTAGAAGATGGTTCAGTGGTGT TCAGTAGTGATCCTGTGCCTGACCTGGTCCTGAGAGCCAGCAGATACCACCGGGCAGGGCAGGAGGTGGA GCCTGGACAGAAGAAGAAGGTCGTGGTTCTACACGTGGACATGTTGAAGTTGGAGGTCCACGTCTCCCTT CACCAGGACTTGGTGAACAGGAAAACGAGAAAGCTGAGAAAAAGCAGTAGACACCAGGGAATCGTACAGC ATCTGGAAGAGTCCTTTGCCGTGGCATCCTTGGTGGAGACTGGCCACCTTGTGGCTTTCTCTCTGATCTC TCACCTCAATGATACCTTCCACTTTGACTCTGAGAAGCTGCGTGTGGGGCAGGGTGTCTGCCTTACCCTC AAGACCACAGAACCGGGAGTGACCGGTCTGATTTTGGCTGTGGAAGGGCCAGCTTCTAAGAGGACCAGGA TGCCAGTTCAGAGGGATTCAGAGACAGTTGATGACAAAGGAGAGGAGAAAGAGGAGGAGGAGGAGGAGGA GGAGAAGGAAGAAGAGAACTTGACTGTGAAGTCTAAGAAAAGGCATAGCCTGGCTATTGGGGACAAAGTC ACTGGGACCATTAAGGCTGTGAAGGCCACACATGTTGTTGTAACCCTAGCTGATGGCTTTGTTGGCTGTA TCCATGCCTCCCGCATCTTAGATGATGTCCCAGTGGGCACCTCGCCTACGACCACACTGAAAGCCGGGAA GAAAGTCACTGCGAGAGTGATCGGTGGGCGAGATGTGAAGACATCTAAGTTTCTCCCAATAAGTCACCCC AGATTTGTTCTGACCATCCTGGAGCTGAGTGTTCGGCCAAGTGAGTTGAAGGGTAGCTACAGTGCTCTTA ATACTCACTCTGAGAGCCCCGTGGAGAAGATCAGGCAGTACCAGGCTGGGCAGACTGTGACCTGCTTCTT CAAGAAGTACAACGTGATGAAGAAGTGGCTTGAAGTGGACATCGGACCGGACATCCGAGGGAGAATTCCC TTGTTGCTCACTTCCCTCAGCTTCAAGGTTCTGAAACACCCAGACAAGAAGTTCCAGGTTGGGCAGGCCA TCGAGGCCACCGTTGTTGACCCAGACGTCCCCAGGGCTTTCTTATGTCTGTCACTCATAGGACCTTACAG ACTTGAAGAAGGTGAAGTGGCCATGGGCCGAGTGATGAAGGTTGTACCCAACAGGGGACTGACCGTCTCC TTCCCTTTTGGGAAGATAGGGAAAGTCAGTATGTTTCACCTGAGCGACTCGTACTCCGAGGCACCCCTGG AGGACTTCTGCCCCCAGAAGATTGTCAGATGTTACATCCTGTCCACAGCACACCGTGTGCTGGCTTTGTC ACTCCGGTCATCCAGGACAAACAGAGAGACAAAAAACAGAATAGAAGATCCAGAAATCAACTCCATTGAG GACGTGAAGGAAGGGCAGCTCCTGCGGGGCTATGTGAAATGTGTCCTGCCAAGCAGTGTGATCATAGGCC TTGGACCTTCAGTTCTGGGTTTGGCCAAGTATTCACATGTCTCTGAGTGTGTCCCACCAGAGAAAGAGCT TTATAACGGATGCCTCCCTGAGGGAAAGCTGGTCACTGCCAAGGTCCTGCGCGTGAACCCCATGAAGAAC CTGATAGAGCTGTCGCTCCTTCCCAGCGACACTGGGAGGCCAGACGTGTTCTCTCCTGCTCCAGAACCAA AACAAGAGGAGAGGAGCGGAGGGGCTGAGGAGGGCCAGAAAAGGAAAGAGAAGAACCAGAAGAGACGGGA GGAGAAGGAAGAGCCCCAGAAGTCACAGAGGGGTGGGCGAGGCAAGCGGGAGCGCCAGGAGTCTGAGAGC GAGCAGGAACTAGTGAACAAGAGGCCAAAGAAGTCTGGAGCCGCAGAAGAAGACGACAGTGGTGTGGAAG TGTACTACCGGGAAGGAGAGGATGAGGTGGGGGAGCCGAAGCTGCCACCCAGGGGGAAGCAGACAAAATC CACAGAGGTGCCCCGGCTGCATCTCTCTTCAGGCTTCCTTTGGGATGTGGGGCTTGACTCTCTGACTCCA GCCTTGCCACTCCGAGAAGAGAGCTCAGACAGCGAGGATGAGCAGCCGCACCAAGCTAAGAAGAAGAAGG GCAAGAAGGAGAGGGAGCTGGAGAAGCAGAAGGCAGAGAAGGAGCTGTCGCGCATTGAGGAGGCACTCAT GGACCCTGGGCGACAGCCAGAGTCTGCGGATGACTTTGACCGGCTGGTGCTAAGCTCTCCCAACAGCTCC ATCCTTTGGCTGCAGTACATGGCTTTCCACCTACAGGCCACGGAGATCGAGAAGGCCCGGGCTGTGGCTG AGAGGGCCCTGAAGACCATCTCATTCAGAGAGGAGCAGGAGAAGCTGAACGTGTGGGTGGCCCTGCTGAA CCTGGAAAACATGTACGGCTCTCAGGAGTCCCTGACTAAGGTCTTCGAGCGAGCTGTGCAGTACAACGAG CCTCTCAAGGTTTTCCTGCATCTGGCTGACATCTACACCAAGTCCGAGAAATACAAGGAAGCTGGTGAGC TGTACAACCGGATGCTGAAACGGTTCCGGCAGGAGAAGGCTGTCTGGATCAAATATGGTGCCTTTGTTTT GGGGAGGAGTCAGGCTGGGGCCAGTCACCGAGTGCTGCAGCGAGCCCTGGAGTGCCTGCCCGCCAAGGAA CATGTGGATGTGATCGTCAAGTTTGCCCAGCTGGAGTTCCAGCTCGGGGACGTGGAGCGCGCTAAAGCCA TTTTTGAAAACACACTGAGCACCTACCCCAAACGCACAGACGTCTGGTCAGTCTACATCGACATGACCAT CAAGCACGGCAGCCAGACAGCAGTCAGGGACATCTTTGAGCGGGTCATTCACCTGAGCCTGGCGCCTAAG AGGATGAAGTTCTTTTTCAAGCGCTACCTGGACTATGAGAAGCAGCACGGCACGGAGAAGGACGTGCAGG CGGTCAAGGCCAAGGCCTTGGAGTATGTGGAGGCCAAGAGCTCGGCGCTGGAGGACTAG
Translation (1862 aa): MANLEESFPRGGTRKLHKSEKSSQQVVEQDNLFDVSTEEGPIKRKKSQKGPAKTKKLKIEKRKSIKSIKE KFEILSLESLCEGMRILGCVKEVSELELVVSLPNGLQGFVQVTEVCDAYTQKLNEQVAQEEPLEDLLRLP ELFSPGMLVRCVVSSLDVTESGKKSVKLSVNPKRVNKVLSADALRPGMLLTGTVSSLEDHGYLVDIGVGG TRAFLSLKKAQEYIRQKNKGAKFKVGQYLTCVVEEVKSNGGVVSLSVEHSEVSSAFATEEQSWNLNNLLP GLLVKAQVQKVTQFGLQLNFLTFFKGLVDFMHLEPKKMGSYSSNQTVKACILCVHPRTRVVRLSLRPIFL HPGRPLTRISYQQLGAVLDDVPVQGFFKNAGAIFRLKDGVLAYARVSHLSDSKKAFNAEAFKPGSTHKCR IIDYSQMDELALLSLRKSIIAAPFLRYHDIKIGTVVKGTVLAIKPFGILVKVGEQIKGLVPSMHLADIMM KNPEKKYSPGDEVKCRVLLCDPEAKKLIMTLKKTLVTSKLSLITCYEGAKPGLQTHGVIIRVKDYGCIVK FYNDVQGLVPKHELSTQHIPDPETVFYTGQVVKVAVLSCEPSKERMLLSFRLLSDSRPKDPGVESSQKKT GAVRIGQLVDVKVLEKTKTGLEVAILPHNTPAFLPTPHLSDHAANGPLLHHWLQTGDTLHRVLCLSQSER HILLCRKPALVSTVEGGQDPKSLSEIQPGMLLIGFVKCIKEYGVFVQFPSGLSGLSPKTIMSDKFVTTPS EHFVEGQTVVAKVTNVDESKQRMLLSLRLSDCSLGDSASTSFLLLCQCLEELQGIRSLMSNQDSVLIQTL ADMTPGMVLDAVVHEVLEDGSVVFSSDPVPDLVLRASRYHRAGQEVEPGQKKKVVVLHVDMLKLEVHVSL HQDLVNRKTRKLRKSSRHQGIVQHLEESFAVASLVETGHLVAFSLISHLNDTFHFDSEKLRVGQGVCLTL KTTEPGVTGLILAVEGPASKRTRMPVQRDSETVDDKGEEKEEEEEEEEKEEENLTVKSKKRHSLAIGDKV TGTIKAVKATHVVVTLADGFVGCIHASRILDDVPVGTSPTTTLKAGKKVTARVIGGRDVKTSKFLPISHP RFVLTILELSVRPSELKGSYSALNTHSESPVEKIRQYQAGQTVTCFFKKYNVMKKWLEVDIGPDIRGRIP LLLTSLSFKVLKHPDKKFQVGQAIEATVVDPDVPRAFLCLSLIGPYRLEEGEVAMGRVMKVVPNRGLTVS FPFGKIGKVSMFHLSDSYSEAPLEDFCPQKIVRCYILSTAHRVLALSLRSSRTNRETKNRIEDPEINSIE DVKEGQLLRGYVKCVLPSSVIIGLGPSVLGLAKYSHVSECVPPEKELYNGCLPEGKLVTAKVLRVNPMKN LIELSLLPSDTGRPDVFSPAPEPKQEERSGGAEEGQKRKEKNQKRREEKEEPQKSQRGGRGKRERQESES EQELVNKRPKKSGAAEEDDSGVEVYYREGEDEVGEPKLPPRGKQTKSTEVPRLHLSSGFLWDVGLDSLTP ALPLREESSDSEDEQPHQAKKKKGKKERELEKQKAEKELSRIEEALMDPGRQPESADDFDRLVLSSPNSS ILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQYNE PLKVFLHLADIYTKSEKYKEAGELYNRMLKRFRQEKAVWIKYGAFVLGRSQAGASHRVLQRALECLPAKE HVDVIVKFAQLEFQLGDVERAKAIFENTLSTYPKRTDVWSVYIDMTIKHGSQTAVRDIFERVIHLSLAPK RMKFFFKRYLDYEKQHGTEKDVQAVKAKALEYVEAKSSALED
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