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Report for CCDS3588.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3588.1 Public Homo sapiens 4 BMP3 24 110 108 CCDS HistoryNCBI Gene:651Re-query CCDS DB by CCDS ID:3588.1Re-query CCDS DB by GeneID:651See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3588.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000282701.4 ENSP00000282701.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000282701.4Link to Ensembl Protein Viewer:ENSP00000282701.2Re-query CCDS DB by Nucleotide ID:ENST00000282701Re-query CCDS DB by Protein ID:ENSP00000282701
Original member Current member NCBI NM_001201.5 NP_001192.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001201.5Link to Protein Sequence:NP_001192.4Re-query CCDS DB by Nucleotide ID:NM_001201Re-query CCDS DB by Protein ID:NP_001192Link to BLAST:NP_001192.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001192.4 472 P12645 472 100% 0 0

Chromosomal Locations for CCDS 3588.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 81031285 81031600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 81045738 81046648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 81053345 81053536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1419 nt):
ATGGCTGGGGCGAGCAGGCTGCTCTTTCTGTGGCTGGGCTGCTTCTGCGTGAGCCTGGCGCAGGGAGAGA
GACCGAAGCCACCTTTCCCGGAGCTCCGCAAAGCTGTGCCAGGTGACCGCACGGCAGGTGGTGGCCCGGA
CTCCGAGCTGCAGCCGCAAGACAAGGTCTCTGAACACATGCTGCGGCTCTATGACAGGTACAGCACGGTC
CAGGCGGCCCGGACACCGGGCTCCCTGGAGGGAGGCTCGCAGCCCTGGCGCCCTCGGCTCCTGCGCGAAG
GCAACACGGTTCGCAGCTTTCGGGCGGCAGCAGCAGAAACTCTTGAAAGAAAAGGACTGTATATCTTCAA
TCTGACATCGCTAACCAAGTCTGAAAACATTTTGTCTGCCACACTGTATTTCTGTATTGGAGAGCTAGGA
AACATCAGCCTGAGTTGTCCAGTGTCTGGAGGATGCTCCCATCATGCTCAGAGGAAACACATTCAGATTG
ATCTTTCTGCATGGACCCTCAAATTCAGCAGAAACCAAAGTCAACTCCTTGGCCATCTGTCAGTGGATAT
GGCCAAATCTCATCGAGATATTATGTCCTGGCTGTCTAAAGATATCACTCAACTCTTGAGGAAGGCCAAA
GAAAATGAAGAGTTCCTCATAGGATTTAACATTACGTCCAAGGGACGCCAGCTGCCAAAGAGGAGGTTAC
CTTTTCCAGAGCCTTATATCTTGGTATATGCCAATGATGCCGCCATTTCTGAGCCAGAAAGTGTGGTATC
AAGCTTACAGGGACACCGGAATTTTCCCACTGGAACTGTTCCCAAATGGGATAGCCACATCAGAGCTGCC
CTTTCCATTGAGCGGAGGAAGAAGCGCTCTACTGGGGTCTTGCTGCCTCTGCAGAACAACGAGCTTCCTG
GGGCAGAATACCAGTATAAAAAGGATGAGGTGTGGGAGGAGAGAAAGCCTTACAAGACCCTTCAGGCTCA
GGCCCCTGAAAAGAGTAAGAATAAAAAGAAACAGAGAAAGGGGCCTCATCGGAAGAGCCAGACGCTCCAA
TTTGATGAGCAGACCCTGAAAAAGGCAAGGAGAAAGCAGTGGATTGAACCTCGGAATTGCGCCAGGAGAT
ACCTCAAGGTAGACTTTGCAGATATTGGCTGGAGTGAATGGATTATCTCCCCCAAGTCCTTTGATGCCTA
TTATTGCTCTGGAGCATGCCAGTTCCCCATGCCAAAGTCTTTGAAGCCATCAAATCATGCTACCATCCAG
AGTATAGTGAGAGCTGTGGGGGTCGTTCCTGGGATTCCTGAGCCTTGCTGTGTACCAGAAAAGATGTCCT
CACTCAGTATTTTATTCTTTGATGAAAATAAGAATGTAGTGCTTAAAGTATACCCTAACATGACAGTAGA
GTCTTGCGCTTGCAGATAA

Translation (472 aa):
MAGASRLLFLWLGCFCVSLAQGERPKPPFPELRKAVPGDRTAGGGPDSELQPQDKVSEHMLRLYDRYSTV
QAARTPGSLEGGSQPWRPRLLREGNTVRSFRAAAAETLERKGLYIFNLTSLTKSENILSATLYFCIGELG
NISLSCPVSGGCSHHAQRKHIQIDLSAWTLKFSRNQSQLLGHLSVDMAKSHRDIMSWLSKDITQLLRKAK
ENEEFLIGFNITSKGRQLPKRRLPFPEPYILVYANDAAISEPESVVSSLQGHRNFPTGTVPKWDSHIRAA
LSIERRKKRSTGVLLPLQNNELPGAEYQYKKDEVWEERKPYKTLQAQAPEKSKNKKKQRKGPHRKSQTLQ
FDEQTLKKARRKQWIEPRNCARRYLKVDFADIGWSEWIISPKSFDAYYCSGACQFPMPKSLKPSNHATIQ
SIVRAVGVVPGIPEPCCVPEKMSSLSILFFDENKNVVLKVYPNMTVESCACR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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