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Report for CCDS1841.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1841.1 Public Homo sapiens 2 STON1 24 110 108 CCDS HistoryNCBI Gene:11037Re-query CCDS DB by CCDS ID:1841.1Re-query CCDS DB by GeneID:11037See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1841.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000406226.1 ENSP00000384615.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406226.1Link to Ensembl Protein Viewer:ENSP00000384615.1Re-query CCDS DB by Nucleotide ID:ENST00000406226Re-query CCDS DB by Protein ID:ENSP00000384615
Original member Current member EBI ENST00000404752.6 ENSP00000385273.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000404752.6Link to Ensembl Protein Viewer:ENSP00000385273.1Re-query CCDS DB by Nucleotide ID:ENST00000404752Re-query CCDS DB by Protein ID:ENSP00000385273
Original member Current member EBI ENST00000649748.1 ENSP00000497745.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649748.1Link to Ensembl Protein Viewer:ENSP00000497745.1Re-query CCDS DB by Nucleotide ID:ENST00000649748Re-query CCDS DB by Protein ID:ENSP00000497745
Original member Current member NCBI NM_001198595.2 NP_001185524.1 Accepted alive Link to Nucleotide Sequence:NM_001198595.2Link to Protein Sequence:NP_001185524.1Re-query CCDS DB by Nucleotide ID:NM_001198595Re-query CCDS DB by Protein ID:NP_001185524Link to BLAST:NP_001185524.1
Original member Current member NCBI NM_006873.4 NP_006864.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006873.4Link to Protein Sequence:NP_006864.2Re-query CCDS DB by Nucleotide ID:NM_006873Re-query CCDS DB by Protein ID:NP_006864Link to BLAST:NP_006864.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001185524.1 735 Q9Y6Q2-1 735 100% 0 0
NP_006864.2 735 Q9Y6Q2-1 735 100% 0 0

Chromosomal Locations for CCDS 1841.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 48580634 48582563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48591653 48591855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 48595228 48595302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2208 nt):
ATGTGCTCCACAAATCCAGGCAAATGGGTCACCTTTGATGATGATCCTGCTGTTCAATCTTCTCAAAAGT
CAAAGAATTTTCCTCTGGAGAATCAAGGTGTCTGTAGACCAAATGGACTGAAGCTGAACCTTCCTGGCCT
CAGGGAATTTCCCAGTGGATCTTCCTCCACCAGCAGCACTCCTCTCTCCTCCCCCATTGTAGATTTTTAT
TTCAGTCCAGGACCTCCAAGTAACTCTCCTCTTTCTACACCTACCAAAGACTTCCCAGGTTTTCCTGGCA
TCCCCAAAGCAGGGACTCATGTGCTTTATCCTATTCCAGAATCATCTTCAGACAGCCCACTCGCAATATC
AGGAGGAGAATCTTCCTTACTGCCTACCAGACCAACATGTTTATCCCATGCCTTGTTACCCAGTGACCAC
TCATGTACACATCCAACTCCCAAAGTAGGTCTTCCAGATGAAGTTAATCCTCAACAGGCTGAAAGCCTAG
GATTCCAAAGTGATGATCTCCCCCAGTTTCAGTATTTTCGAGAGGACTGTGCTTTTTCAAGTCCATTTTG
GAAAGATGAAGGCAGTGATTCCCATTTCACCCTTGACCCACCAGGAAGCAAAAAGATGTTCTCATCAAGA
AACAAGGAGATGCCTATTGACCAAAAAAGCCTAAATAAGTGTTCACTCAACTATATCTGTGAGAAGCTTG
AACATCTCCAGTCAGCTGAGAACCAAGACTCACTTAGAAGTTTGTCTATGCACTGTCTATGTGCTGAAGA
AAATGCCTCTTCCTTTGTCCCCCACACACTCTTCAGGAGTCAGCCAAAATCCGGATGGTCTTTCATGCTG
AGAATTCCTGAGAAGAAGAATATGATGTCTTCCCGGCAATGGGGACCAATTTTTCTGAAAGTTTTGCCTG
GAGGAATTTTGCAGATGTATTATGAACAGGGATTAGAAAAACCATTTAAAGAGATACAGCTTGATCCATA
TTGTAGGCTTTCTGAACCCAAGGTTGAGAACTTCAGTGTAGCAGGAAAAATCCACACTGTGAAGATTGAA
CATGTGTCTTACACAGAAAAAAGGAAATACCATTCTAAGACAGAAGTAGTTCATGAACCTGACATAGAGC
AGATGCTGAAGTTGGGGTCCACATCGTACCATGACTTCCTTGACTTTCTGACTACTGTGGAGGAGGAGCT
GATGAAGTTGCCAGCTGTTTCAAAACCAAAAAAGAACTACGAGGAGCAAGAAATTTCCTTGGAAATTGTG
GACAACTTTTGGGGTAAAGTCACAAAAGAAGGAAAATTTGTTGAAAGTGCTGTGATAACTCAAATTTATT
GCCTCTGCTTTGTGAATGGGAACCTGGAATGCTTTTTAACCTTGAATGACCTTGAGTTGCCGAAGCGAGA
TGAATCCTATTATGAGAAGGACTCAGAAAAAAAGGGGATTGATATTCTTGACTACCATTTTCATAAGTGT
GTGAATGTACAAGAATTTGAGCAATCAAGAATCATTAAGTTTGTACCTCTGGATGCCTGCCGGTTTGAGC
TGATGCGTTTCAAGACTTTGTATAATGGGGATAATCTTCCCTTTTCCTTGAAGTCTGTAGTGGTTGTCCA
GGGAGCATACGTGGAACTTCAGGCTTTTGTCAACATGGCCTCATTGGCGCAGAGGTCATCCTATGCTGGT
TCCTTAAGGTCCTGTGACAATATAAGGATACACTTTCCTGTCCCATCGCAGTGGATCAAGGCCCTTTGGA
CCATGAACCTCCAGAGGCAGAAGTCTCTGAAAGCTAAAATGAACCGCCGAGCATGTCTGGGGAGTTTACA
GGAACTTGAATCTGAACCTGTCATTCAAGTCACTGTGGGGTCAGCAAAATATGAGAGTGCCTACCAGGCA
GTGGTATGGAAGATAGATCGGCTTCCAGACAAAAATTCAAGTCTAGATCATCCCCATTGTCTGTCATACA
AATTAGAGCTTGGATCAGACCAAGAAATTCCCTCTGATTGGTATCCATTTGCTACTGTTCAGTTTTCCGT
GCCTGACACCTGTGCCTCAAGGACAGAGGTCAGGTCTCTGGGAGTGGAGAGTGATGTCCAGCCACAGAAA
CATGTTCAGCAGCGAGCTTGCTACAACATCCAGGTTGAAATAGAAAAGAAGTGGATTAAAATCGATGGAG
AAGACCCAGATAAAATTGGTGACTGCATAACTCAGTAG

Translation (735 aa):
MCSTNPGKWVTFDDDPAVQSSQKSKNFPLENQGVCRPNGLKLNLPGLREFPSGSSSTSSTPLSSPIVDFY
FSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVLYPIPESSSDSPLAISGGESSLLPTRPTCLSHALLPSDH
SCTHPTPKVGLPDEVNPQQAESLGFQSDDLPQFQYFREDCAFSSPFWKDEGSDSHFTLDPPGSKKMFSSR
NKEMPIDQKSLNKCSLNYICEKLEHLQSAENQDSLRSLSMHCLCAEENASSFVPHTLFRSQPKSGWSFML
RIPEKKNMMSSRQWGPIFLKVLPGGILQMYYEQGLEKPFKEIQLDPYCRLSEPKVENFSVAGKIHTVKIE
HVSYTEKRKYHSKTEVVHEPDIEQMLKLGSTSYHDFLDFLTTVEEELMKLPAVSKPKKNYEEQEISLEIV
DNFWGKVTKEGKFVESAVITQIYCLCFVNGNLECFLTLNDLELPKRDESYYEKDSEKKGIDILDYHFHKC
VNVQEFEQSRIIKFVPLDACRFELMRFKTLYNGDNLPFSLKSVVVVQGAYVELQAFVNMASLAQRSSYAG
SLRSCDNIRIHFPVPSQWIKALWTMNLQRQKSLKAKMNRRACLGSLQELESEPVIQVTVGSAKYESAYQA
VVWKIDRLPDKNSSLDHPHCLSYKLELGSDQEIPSDWYPFATVQFSVPDTCASRTEVRSLGVESDVQPQK
HVQQRACYNIQVEIEKKWIKIDGEDPDKIGDCITQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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