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Report for CCDS53164.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53164.1 Public Mus musculus X Nap1l2 23 108 98 CCDS HistoryNCBI Gene:17954Re-query CCDS DB by CCDS ID:53164.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53164.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000121720.1 ENSMUSP00000112677.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000121720.1Link to Ensembl Protein Viewer:ENSMUSP00000112677.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000121720Re-query CCDS DB by Protein ID:ENSMUSP00000112677
Original member NCBI NM_008671.2 NP_032697.2 Updated not alive Link to Nucleotide Sequence:NM_008671.2Link to Protein Sequence:NP_032697.2Re-query CCDS DB by Nucleotide ID:NM_008671Re-query CCDS DB by Protein ID:NP_032697
Current member NCBI NM_008671.3 NP_032697.2 Accepted alive Link to Nucleotide Sequence:NM_008671.3Link to Protein Sequence:NP_032697.2Re-query CCDS DB by Nucleotide ID:NM_008671Re-query CCDS DB by Protein ID:NP_032697Link to BLAST:NP_032697.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032697.2 460 P51860 460 100% 0 0

Chromosomal Locations for CCDS 53164.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 103184928 103186310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1383 nt):
ATGGCTGAATCAGTCGACCATAAAGAACTGTCTGAATCCAACCAAGAAGAGCTTGGCAGCCAGGTAATGG
CG
GAGGGGCCCGGGGAAAGTCAGGACCGCAGTGAAGGTGTCTCCATTGAGCCTGGAGATGGCGGGCAACA
T
GGTGAAGAAACCGTGGCTGCTGGAGTAGGGGAAGAGGGAAAAGGTGAAGAAGCTGCTGCAGGGTCTGGG
GAA
GATGCTGGGAAGTGCGGAGGCACTGATGAGGACTCAGACTCAGACCGTCCAAAAGGACTTATCGGTT
AT
CTTTTAGATACCGATTTCGTTGAAAGTCTCCCAGTGAAAGTTAAGTGCCGAGTGCTAGCTCTTAAAAA
G
CTTCAAACAAGAGCTGCCCATTTGGAATCCAAATTCCTGAGGGAATTTCATGACATTGAAAGGAAGTTT
GCT
GAAATGTACCAACCCTTACTAGAAAAAAGACGACAGATCATCAATGCAGTCTATGAGCCCACAGAAG
AG
GAATGTGAGTATAAATCGGACTGTGAGGACTATTTTGAGGAGGAGATGGATGAGGAGGAAGAGACTAA
C
GGCAACGAAGACGGTATGGTGCATGAATACGTGGATGAAGATGATGGTTATGAGGACTGTTATTATGAT
TAT
GATGACGAGGAAGAAGAGGAGGAGGAAGATGACAGCGCTGGGGCCACCGGAGGAGAAGAGGTTAACG
AA
GAGGATCCTAAGGGGATTCCGGATTTTTGGTTGACTGTTTTAAAAAATGTTGAAGCACTCACTCCTAT
G
ATTAAGAAATATGATGAGCCTATTCTGAAGCTGCTGACAGATATTAAAGTGAAGCTTTCGGATCCCGGG
GAG
CCTCTCAGCTTCACACTCGAATTTCACTTCAAGCCCAATGAATATTTTAAAAATGAGCTGTTGACAA
AG
ACTTATGTGCTGAAGTCAAAGCTTGCATGCTACGATCCCCACCCTTATAGGGGAACTGCCATTGAGTA
C
GCCACTGGCTGCGACATAGATTGGAACGAAGGGAAGAATGTCACTTTGAGAACCATCAAGAAGAAGCAG
AGA
CATCGCGTCTGGGGAACTGTCCGAACTGTGACTGAAGATTTTCCCAAGGACTCTTTCTTCAATTTCT
TC
TCTCCTCATGGGATCAGCTTAAATGGAGGGGATGAAAATGATGATTTTTTACTTGGTCATAATCTGCG
T
ACTTACATAATTCCAAGATCAGTGTTATTTTTCTCAGGAGATGCACTTGAATCTCAGCAGGAGGGTGTA
GTT
AGGGAAGTTAATGACGAAATATATGACAAAATTATTTATGATGATTGGATGGCTGCAATTGAAGAGG
TT
AAAGCCTGTTGCAAAAATCTTGAGGCATTAGTAGAAGATATTGATCGTTAA


Translation (460 aa):
MAESVDHKELSESNQEELGSQVMAEGPGESQDRSEGVSIEPGDGGQHGEETVAAGVGEEGKGEEAAAGSG
E
DAGKCGGTDEDSDSDRPKGLIGYLLDTDFVESLPVKVKCRVLALKKLQTRAAHLESKFLREFHDIERKF
A
EMYQPLLEKRRQIINAVYEPTEEECEYKSDCEDYFEEEMDEEEETNGNEDGMVHEYVDEDDGYEDCYYD
Y
DDEEEEEEEDDSAGATGGEEVNEEDPKGIPDFWLTVLKNVEALTPMIKKYDEPILKLLTDIKVKLSDPG
E
PLSFTLEFHFKPNEYFKNELLTKTYVLKSKLACYDPHPYRGTAIEYATGCDIDWNEGKNVTLRTIKKKQ
R
HRVWGTVRTVTEDFPKDSFFNFFSPHGISLNGGDENDDFLLGHNLRTYIIPRSVLFFSGDALESQQEGV
V
REVNDEIYDKIIYDDWMAAIEEVKACCKNLEALVEDIDR




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